Python module for registering and fusing multi-view microscopy data
☆24Mar 8, 2025Updated last year
Alternatives and similar repositories for MVRegFus
Users that are interested in MVRegFus are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Apr 20, 2026Updated last month
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆20Aug 10, 2023Updated 2 years ago
- scalable multiscale image pyramids in python☆29Jul 25, 2024Updated last year
- Command-line client for Fractal☆49Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Reference implementation of the Graph Exchange File Format☆39Updated this week
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Nov 13, 2025Updated 6 months ago
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆70Updated this week
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Oct 8, 2025Updated 7 months ago
- For laying organizational groundwork☆18Jul 12, 2020Updated 5 years ago
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 5 years ago
- A Python toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆116May 15, 2026Updated last week
- Paint segmentations directly to on-disk/remote zarr arrays☆16Mar 25, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Mar 25, 2025Updated last year
- ☆15Feb 5, 2025Updated last year
- Napari gaming☆17Dec 22, 2021Updated 4 years ago
- Tools for handling FIB-SEM data and annotations☆21Apr 4, 2025Updated last year
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- Content-adaptive storage and processing of large volumetric microscopy data using the Adaptive Particle Representation (APR)☆21Aug 21, 2024Updated last year
- Loading and saving of image data.☆10Feb 9, 2024Updated 2 years ago
- A napari plugin for itk-elastix☆42Feb 16, 2026Updated 3 months ago
- Optimize image processing workflows in napari☆17May 1, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- GIve easy, high-level access to ome-zarr fileset☆22Sep 22, 2025Updated 8 months ago
- ☆33May 2, 2025Updated last year
- CUDA-accelerated 3D BioImage Computing (ICCV BIC 2025)☆30Apr 3, 2026Updated last month
- Tools for distributed alignment of massive images☆95Updated this week
- simple package for augmentation of n-dimensional arrays☆34Aug 10, 2023Updated 2 years ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆31Mar 14, 2025Updated last year
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated 2 years ago
- Particle tracking by solving linear assignment problem.☆64May 8, 2026Updated 2 weeks ago
- A python package for fitting splines.☆23May 8, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 8 months ago
- Quantitative Data Analysis for spectroscopic LEEM☆18Feb 17, 2022Updated 4 years ago
- Robust quad-tree based registration on whole slide images☆20Apr 2, 2025Updated last year
- Fast global mutual information-based rigid alignment in the Fourier domain☆31Apr 3, 2026Updated last month
- Python libraries for loading, running and packaging bioimage.io models☆38Updated this week
- A writer and reader for NGFF OME-Zarr datasets☆14Nov 2, 2021Updated 4 years ago
- A fully scalable robust image feature extraction library.☆28May 13, 2026Updated last week