fiji / AnalyzeSkeleton
ImageJ/Fiji plugin to analyze 2D and 3D skeleton images
☆26Updated 2 years ago
Alternatives and similar repositories for AnalyzeSkeleton:
Users that are interested in AnalyzeSkeleton are comparing it to the libraries listed below
- A collection of tools for the analysis of biological data☆12Updated 9 years ago
- FluoRender is an interactive tool for confocal microscopy data analysis.☆42Updated last week
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆83Updated last year
- A napari plugin for itk-elastix☆38Updated 9 months ago
- Ranking Operator Response of Path Openings☆28Updated last year
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆54Updated this week
- 2D/3D biopolymer network extraction and quantification.☆14Updated 2 years ago
- Fast global mutual information-based rigid alignment in the Fourier domain☆29Updated 7 months ago
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆15Updated 6 years ago
- A general illumination correction method for optical microscopy.☆39Updated 3 years ago
- Collection of mathematical morphology methods and plugins for ImageJ☆102Updated last month
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆146Updated 3 weeks ago
- Spatial Graph Extractor. Library and scripts to study graphs extracted from binary images, or to generate graphs and analyze them complet…☆5Updated 2 months ago
- Python module to analyse skeleton (thin object) images☆121Updated 3 months ago
- Python TEASAR Skeletonization for Sparse Labels☆9Updated last year
- Image Cytometry Standard file reading and writing.☆18Updated 6 months ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 6 years ago
- GPU accelerated volume rendering / processing in Python☆118Updated 6 years ago
- Easily read and write ome-tiff images in python☆26Updated 10 months ago
- Aligner for large scale serial section image data☆15Updated last year
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆30Updated 2 months ago
- ImageJ plugin for morphological data mining, 3D modeling and image stitching, registration, editing and annotation.☆31Updated 6 months ago
- Official SuperElastix repository☆86Updated 5 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆73Updated last month
- Accelerated Pixel and Object Classifiers (APOC)☆55Updated last month
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆11Updated 3 years ago
- www.vaa3d.org☆79Updated 7 years ago
- ImageJ/Fiji plugin for consistent elastic registration of 2D images☆23Updated 2 years ago
- Library for producing and processing on the Adaptive Particle Representation (APR).☆48Updated last week
- ☆24Updated 2 weeks ago