fiji / AnalyzeSkeletonLinks
ImageJ/Fiji plugin to analyze 2D and 3D skeleton images
☆28Updated 3 years ago
Alternatives and similar repositories for AnalyzeSkeleton
Users that are interested in AnalyzeSkeleton are comparing it to the libraries listed below
Sorting:
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆56Updated 4 months ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆176Updated last week
- An open-source application for the analysis and visualization of segmented vasculature datasets☆123Updated last year
- 2D/3D biopolymer network extraction and quantification.☆16Updated 2 months ago
- An implementation of morphological contour interpolation☆34Updated 2 weeks ago
- Python module to analyse skeleton (thin object) images☆138Updated last month
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆89Updated last year
- Aligner for large scale serial section image data☆16Updated 2 years ago
- A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.☆13Updated 6 years ago
- www.vaa3d.org☆80Updated 7 years ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆27Updated 5 years ago
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆35Updated last month
- Collection of mathematical morphology methods and plugins for ImageJ☆110Updated 2 weeks ago
- Fast global mutual information-based rigid alignment in the Fourier domain☆32Updated last year
- Fiji library to perform image segmentation based on the Weka learning schemes☆120Updated last year
- Ranking Operator Response of Path Openings☆29Updated last year
- ImgLib2/BDV implementation of Stitching for large datasets☆77Updated this week
- Official SuperElastix repository☆88Updated 6 years ago
- A napari plugin for itk-elastix☆39Updated last week
- Fast, Texture Feature Maps from N-Dimensional Images☆25Updated 7 months ago
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…☆71Updated 2 years ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆74Updated 4 years ago
- Montaging for microscopy imaging files☆30Updated 2 months ago
- Thin wrapper around elastix - a toolbox for rigid and nonrigid registration of images☆110Updated 5 years ago
- Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the Universit…☆116Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 3 months ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- Easily read and write ome-tiff images in python☆28Updated last year
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Updated 2 weeks ago
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆45Updated 4 months ago