ZEISS / czicompressLinks
Reduce the size of existing CZI-documents by converting them to zstd-compressed CZI documents
☆24Updated this week
Alternatives and similar repositories for czicompress
Users that are interested in czicompress are comparing it to the libraries listed below
Sorting:
- ☆38Updated last year
- libCZI is an Open Source Cross-Platform C++ library to read and write CZI.☆58Updated last week
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- An ImageJ script to align and stitch three-dimensional tiles and quickly explore terabyte-sized microscopy datasets☆13Updated 3 years ago
- Spotiflow plugin for napari☆13Updated last month
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆29Updated 5 months ago
- Use Napari Viewer to display CZI images☆12Updated 3 years ago
- This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python. In addition it al…☆16Updated 2 weeks ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated 3 weeks ago
- ☆22Updated 2 years ago
- Particle tracking by solving linear assignment problem.☆58Updated 2 weeks ago
- ☆19Updated 5 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated 2 weeks ago
- ☆11Updated last month
- ☆13Updated 5 years ago
- dask empowered fast4dreg☆15Updated 11 months ago
- ImageJ convenience layer for N5☆17Updated 2 months ago
- Dataset EXploration & Processing☆32Updated 2 years ago
- python tools for BigDataViewer☆22Updated 10 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 8 months ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆19Updated 6 months ago
- A napari plugin for making animations☆90Updated 3 weeks ago
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆24Updated 6 months ago
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆28Updated 3 months ago
- Creating figures and animations for multi-channel images with a focus on microscopy.☆78Updated 10 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆69Updated 3 weeks ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- 1d plotting in napari-based canvas.☆26Updated last week
- A plugin to read whole slide images within napari.☆21Updated 8 months ago
- ☆51Updated 5 months ago