czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html
☆14Oct 15, 2025Updated 10 months ago
Alternatives and similar repositories for czifile
Users that are interested in czifile are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This package can be used to read image data using BioFormats into numpy arrays. It was initially created to read CZI image files, but sho…☆12May 21, 2021Updated 5 years ago
- Python module utilizing libCZI for reading Zeiss CZI files.☆48Updated this week
- ☆10Oct 26, 2022Updated 3 years ago
- ☆75Updated this week
- Read and write layered TIFF ImageSourceData and ImageResources tags.☆27Jan 29, 2026Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Generate, merge, and visualize h5 files☆11Jul 19, 2025Updated last year
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Jan 24, 2017Updated 9 years ago
- this repo contains a number of checklists that we find very useful☆12Oct 14, 2018Updated 7 years ago
- PyFRAP: A Python based FRAP analysis tool box☆17Feb 1, 2026Updated 6 months ago
- Low-rank Highway Networks☆13Mar 11, 2016Updated 10 years ago
- mcib3d core library for 3D ImageJ suite☆16Oct 6, 2022Updated 3 years ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆23Apr 10, 2023Updated 3 years ago
- A list of (detailed, non-stochastic) action potential models, with links to papers, source code, CellML and Myokit implementations☆12Jul 22, 2026Updated last month
- introductory material☆18Nov 24, 2015Updated 10 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Reconstruction and image processing of micro-CT/nano-CT data taken at SPring-8 and APS Argonne.☆15Jul 7, 2026Updated last month
- Fill holes in binary 2D & 3D images fast.☆30Apr 29, 2026Updated 4 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Aug 22, 2024Updated 2 years ago
- Research Software Design by Example☆13Sep 7, 2025Updated 11 months ago
- PackBits encoder/decoder for Python☆20Nov 12, 2022Updated 3 years ago
- Contact angle image processing analysis☆29Jun 6, 2021Updated 5 years ago
- A collection of scripts used to recreate files and graphs used in the MMRF CoMMpass analysis.☆25Nov 23, 2025Updated 9 months ago
- Single-cell exploratory data analysis for RNA-Seq☆40Apr 24, 2021Updated 5 years ago
- Empirical Time and Memory Complexity Estimation☆11Jun 17, 2019Updated 7 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆116Updated this week
- ☆14Jan 24, 2019Updated 7 years ago
- Next generation ODE translator☆13Updated this week
- Open Source Cross-Platform C++ library to read CZI image files☆72Sep 30, 2022Updated 3 years ago
- An example repository to understand the basics of REUSE☆14Apr 28, 2024Updated 2 years ago
- Implementation of Combat harmonization method with scikit-learn compatible format☆25Oct 16, 2019Updated 6 years ago
- Bootstrapped Analysis of Stable Clusters- A semi-automated fMRI individual and group level functional parcellation technique☆26Oct 11, 2019Updated 6 years ago
- Biologically detailed neural network simulations and analysis API☆14Feb 26, 2025Updated last year
- Tool for saving HDR file as RGBM, RGBD, RGBE or LogLuv TGA file.☆12Oct 28, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Software library for Maldi-Tof preprocessing and machine learning analysis.☆40May 9, 2023Updated 3 years ago
- Lumenera USB camera interface.☆12Mar 27, 2024Updated 2 years ago
- N-dimensional, multiresolution file format for Micro-Manager☆16Jun 17, 2026Updated 2 months ago
- ☆12Feb 23, 2026Updated 6 months ago
- Python bindings to zopfli☆14Jun 10, 2026Updated 2 months ago
- RBniCSx - reduced order modelling in FEniCSx☆12Updated this week
- Javascript library for defining and solving DAE equations efficiently using WebAssembly☆17Sep 23, 2025Updated 11 months ago