czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html
☆14Oct 15, 2025Updated 11 months ago
Alternatives and similar repositories for czifile
Users that are interested in czifile are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This package can be used to read image data using BioFormats into numpy arrays. It was initially created to read CZI image files, but sho…☆12May 21, 2021Updated 5 years ago
- Python module utilizing libCZI for reading Zeiss CZI files.☆49Sep 30, 2026Updated last week
- ☆10Oct 26, 2022Updated 3 years ago
- ☆74Updated this week
- Read and write layered TIFF ImageSourceData and ImageResources tags.☆28Jan 29, 2026Updated 8 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Generate, merge, and visualize h5 files☆11Jul 19, 2025Updated last year
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Jan 24, 2017Updated 9 years ago
- PyFRAP: A Python based FRAP analysis tool box☆17Feb 1, 2026Updated 8 months ago
- Alfred Workflow to work with templates and the bear macOS app☆25Jan 22, 2026Updated 8 months ago
- introductory material☆18Nov 24, 2015Updated 10 years ago
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- image stacks in python (multi-page tiff), with depth color coding.☆19Jun 2, 2022Updated 4 years ago
- Fill holes in binary 2D & 3D images fast.☆30Apr 29, 2026Updated 5 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Aug 22, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- PackBits encoder/decoder for Python☆20Nov 12, 2022Updated 3 years ago
- Contact angle image processing analysis☆30Jun 6, 2021Updated 5 years ago
- Single-cell exploratory data analysis for RNA-Seq☆41Apr 24, 2021Updated 5 years ago
- ☆119Sep 24, 2026Updated 2 weeks ago
- ☆14Jan 24, 2019Updated 7 years ago
- Python wrapper around KINSOL (from the sundials library)☆10Aug 18, 2026Updated last month
- ☆15Feb 13, 2026Updated 7 months ago
- Open Source Cross-Platform C++ library to read CZI image files☆73Sep 30, 2022Updated 4 years ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆55Sep 14, 2020Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- An example repository to understand the basics of REUSE☆14Apr 28, 2024Updated 2 years ago
- Brainstorm how to make scientific Python ecosystem faster☆12Jul 19, 2024Updated 2 years ago
- C++ whole slide image reader with native python bindings☆55Sep 22, 2026Updated 2 weeks ago
- Examples of pybind11 based projects (using cmake)☆12Nov 14, 2020Updated 5 years ago
- Bootstrapped Analysis of Stable Clusters- A semi-automated fMRI individual and group level functional parcellation technique☆26Oct 11, 2019Updated 6 years ago
- Tool for saving HDR file as RGBM, RGBD, RGBE or LogLuv TGA file.☆12Oct 28, 2023Updated 2 years ago
- Software library for Maldi-Tof preprocessing and machine learning analysis.☆40May 9, 2023Updated 3 years ago
- Lumenera USB camera interface.☆13Mar 27, 2024Updated 2 years ago
- N-dimensional, multiresolution file format for Micro-Manager☆16Jun 17, 2026Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆12Feb 23, 2026Updated 7 months ago
- Constitutive hyperelastic material formulations for FElupe.☆15Feb 13, 2026Updated 7 months ago
- Python bindings to zopfli☆14Jun 10, 2026Updated 3 months ago
- Pair correlation function analysis of fluorescence fluctuations in big image time series.☆11Feb 25, 2026Updated 7 months ago
- ☆12Sep 29, 2026Updated last week
- Javascript library for defining and solving DAE equations efficiently using WebAssembly☆17Sep 23, 2025Updated last year
- Preprint classes for biological journals☆31Feb 19, 2026Updated 7 months ago