czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html
☆15Oct 15, 2025Updated 5 months ago
Alternatives and similar repositories for czifile
Users that are interested in czifile are comparing it to the libraries listed below
Sorting:
- Python module utilizing libCZI for reading Zeiss CZI files.☆47Apr 14, 2025Updated 11 months ago
- This package can be used to read image data using BioFormats into numpy arrays. It was initially created to read CZI image files, but sho…☆12May 21, 2021Updated 4 years ago
- ☆10Oct 26, 2022Updated 3 years ago
- Read and write layered TIFF ImageSourceData and ImageResources tags.☆27Jan 29, 2026Updated last month
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Jan 24, 2017Updated 9 years ago
- Generate, merge, and visualize h5 files☆11Jul 19, 2025Updated 8 months ago
- introductory material☆18Nov 24, 2015Updated 10 years ago
- Python wrapper around cvodes (from the sundials library)☆35Sep 9, 2025Updated 6 months ago
- Alfred Workflow to work with templates and the bear macOS app☆25Jan 22, 2026Updated 2 months ago
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- Morphological snakes for image segmentation and tracking☆16Jul 8, 2019Updated 6 years ago
- Code examples for "Under the hood of calling C/C++ from Python"☆13Sep 16, 2020Updated 5 years ago
- Fill holes in binary 2D & 3D images fast.☆29Sep 10, 2025Updated 6 months ago
- Research Software Design by Example☆13Sep 7, 2025Updated 6 months ago
- Single-cell exploratory data analysis for RNA-Seq☆40Apr 24, 2021Updated 4 years ago
- 👀 An all-purpose eye tracking web application and API for Alzheimer's disease research (3 tasks, <3 mins). 1st place in the 2021 CNT hac…☆13Jun 17, 2021Updated 4 years ago
- ☆14Jan 24, 2019Updated 7 years ago
- Python wrapper around KINSOL (from the sundials library)☆10Nov 24, 2025Updated 3 months ago
- Contact angle image processing analysis☆28Jun 6, 2021Updated 4 years ago
- Brainstorm how to make scientific Python ecosystem faster☆11Jul 19, 2024Updated last year
- Open Source Cross-Platform C++ library to read CZI image files☆72Sep 30, 2022Updated 3 years ago
- Read and write ImageJ ROI format.☆87Feb 11, 2026Updated last month
- Implementation of Combat harmonization method with scikit-learn compatible format☆24Oct 16, 2019Updated 6 years ago
- Examples of pybind11 based projects (using cmake)☆12Nov 14, 2020Updated 5 years ago
- Biologically detailed neural network simulations and analysis API☆14Feb 26, 2025Updated last year
- Software library for Maldi-Tof preprocessing and machine learning analysis.☆39May 9, 2023Updated 2 years ago
- Read Becker & Hickl SDT files.☆14Feb 9, 2026Updated last month
- N-dimensional, multiresolution file format for Micro-Manager☆14Mar 13, 2026Updated last week
- Python library for reading tiles from wsi tiff-files.☆16Updated this week
- Python bindings to zopfli☆14Feb 13, 2026Updated last month
- Pair correlation function analysis of fluorescence fluctuations in big image time series.☆10Feb 25, 2026Updated 3 weeks ago
- A Riks arclength solver implemented in FEniCS☆15Jan 8, 2026Updated 2 months ago
- ☆13Feb 13, 2026Updated last month
- ☆10Mar 12, 2026Updated last week
- Preprint classes for biological journals☆31Feb 19, 2026Updated last month
- Read and write life sciences file formats☆142Jun 12, 2025Updated 9 months ago
- Learning platform for category theory in python☆17Updated this week
- Code from livestreams of Combinatory Logic in C++☆17May 26, 2023Updated 2 years ago
- A molecular docking pipeline for the drug database against SARS-CoV2☆14Jan 20, 2021Updated 5 years ago