czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html
☆15Oct 15, 2025Updated 6 months ago
Alternatives and similar repositories for czifile
Users that are interested in czifile are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python module utilizing libCZI for reading Zeiss CZI files.☆47Mar 31, 2026Updated last month
- This package can be used to read image data using BioFormats into numpy arrays. It was initially created to read CZI image files, but sho…☆12May 21, 2021Updated 4 years ago
- Read and write layered TIFF ImageSourceData and ImageResources tags.☆27Jan 29, 2026Updated 3 months ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Jan 24, 2017Updated 9 years ago
- Low-rank Highway Networks☆13Mar 11, 2016Updated 10 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Water Hackweek Machine Learning workshop☆15Sep 2, 2020Updated 5 years ago
- UCLA Dining Hall Menus Dataset☆11Apr 19, 2017Updated 9 years ago
- PyFRAP: A Python based FRAP analysis tool box☆17Feb 1, 2026Updated 3 months ago
- ImageJ/Fiji plugin to analyze 2D and 3D skeleton images☆28Jun 14, 2022Updated 3 years ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆23Apr 10, 2023Updated 3 years ago
- introductory material☆18Nov 24, 2015Updated 10 years ago
- Reconstruction and image processing of micro-CT/nano-CT data taken at SPring-8 and APS Argonne.☆15Feb 6, 2026Updated 2 months ago
- Fill holes in binary 2D & 3D images fast.☆29Apr 18, 2026Updated last week
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This is an older version of cytosim, a cytoskeleton simulation engine☆29Nov 2, 2021Updated 4 years ago
- Software to estimate oligonucleotide duplexes melting temperature. Includes state-of-the-art monovalent (e.g., Na+) and bivalent (Mg2+) i…☆12Sep 18, 2022Updated 3 years ago
- A list of (detailed, non-stochastic) action potential models, with links to papers, source code, CellML and Myokit implementations☆12Mar 16, 2026Updated last month
- Structure tensor analysis toolbox for MATLAB☆16Jun 5, 2020Updated 5 years ago
- ☆19May 6, 2023Updated 2 years ago
- ☆112Apr 13, 2026Updated 2 weeks ago
- Next generation ODE translator☆13Apr 21, 2026Updated last week
- ☆14Jan 24, 2019Updated 7 years ago
- Python wrapper around KINSOL (from the sundials library)☆10Nov 24, 2025Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆10Mar 15, 2024Updated 2 years ago
- An example repository to understand the basics of REUSE☆14Apr 28, 2024Updated 2 years ago
- Contact angle image processing analysis☆28Jun 6, 2021Updated 4 years ago
- Python module to handle Bruker Paravision MRI files (parameter files, raw data, processed data).☆21Feb 3, 2026Updated 2 months ago
- Brainstorm how to make scientific Python ecosystem faster☆11Jul 19, 2024Updated last year
- Open Source Cross-Platform C++ library to read CZI image files☆72Sep 30, 2022Updated 3 years ago
- Implementation of Combat harmonization method with scikit-learn compatible format☆24Oct 16, 2019Updated 6 years ago
- Bootstrapped Analysis of Stable Clusters- A semi-automated fMRI individual and group level functional parcellation technique☆26Oct 11, 2019Updated 6 years ago
- Data Information System (DAISY) is a data bookkeeping application designed to help Biomedical Research institutions with their GDPR comp…☆16Apr 24, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Tool for saving HDR file as RGBM, RGBD, RGBE or LogLuv TGA file.☆13Oct 28, 2023Updated 2 years ago
- Benchmarking physics-constrained data-driven models of hyperelasticity against rubber and soft tissue datasets☆16Jan 15, 2023Updated 3 years ago
- Lumenera USB camera interface.☆11Mar 27, 2024Updated 2 years ago
- Software library for Maldi-Tof preprocessing and machine learning analysis.☆40May 9, 2023Updated 2 years ago
- Read Becker & Hickl SDT files.☆14Feb 9, 2026Updated 2 months ago
- N-dimensional, multiresolution file format for Micro-Manager☆14Mar 13, 2026Updated last month
- Python library for reading tiles from wsi tiff-files.☆16Mar 18, 2026Updated last month