ZEISS / libcziLinks
libCZI is an Open Source Cross-Platform C++ library to read and write CZI.
☆58Updated this week
Alternatives and similar repositories for libczi
Users that are interested in libczi are comparing it to the libraries listed below
Sorting:
- native Python dataclasses for the OME data model☆61Updated last week
- A napari plugin for zarr backed OME-NGFF images☆37Updated 2 weeks ago
- ☆38Updated last year
- A 3D interactivity toolbox for napari☆37Updated 3 months ago
- Reduce the size of existing CZI-documents by converting them to zstd-compressed CZI documents☆24Updated 2 weeks ago
- ☆51Updated this week
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆30Updated last week
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 3 weeks ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆24Updated 6 months ago
- Command-line client for Fractal☆47Updated last week
- Ngio is a Python library to streamline OME-Zarr image analysis workflows.☆24Updated this week
- ☆39Updated last week
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆18Updated last week
- A simple and easy-to-use Python wrapper for libCZI - a cross-platform C++ library intended for providing read and write access to CZI doc…☆23Updated this week
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆28Updated 2 months ago
- ☆22Updated 2 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Cookiecutter for napari plugins☆70Updated 11 months ago
- ☆32Updated 5 months ago
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- Fusing image tiles with dask array's map_blocks☆30Updated last year
- ☆23Updated 3 weeks ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆68Updated last month
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆16Updated 6 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 2 months ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆40Updated 2 weeks ago
- Tool for segmentation in bioimaging☆35Updated this week
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆21Updated 2 months ago
- Pydantic models for OME-NGFF☆24Updated 3 weeks ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆20Updated last week