piximi / piximi_oldLinks
a free, open-source web app for annotating, training, and evaluating image understanding algorithms
☆25Updated 3 years ago
Alternatives and similar repositories for piximi_old
Users that are interested in piximi_old are comparing it to the libraries listed below
Sorting:
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Updated 5 years ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆29Updated 5 months ago
- Block-wise task scheduling for large nD volumes.☆32Updated 6 months ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- ☆39Updated last week
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆17Updated 2 weeks ago
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆15Updated 6 years ago
- Discover, install, and share napari plugins☆52Updated last week
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆16Updated 3 months ago
- Process images using SimpleITK in napari☆22Updated 5 months ago
- Track and lineage visualization with btrack and Napari☆46Updated last week
- Advanced Tool for Labeling And Segmentation☆39Updated 11 months ago
- ☆23Updated 3 weeks ago
- CLIJ is deprecated. Visit CLIJ2☆56Updated 4 years ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Updated last year
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 4 years ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 7 months ago
- Lectures for a napari training course☆50Updated 2 years ago
- Python image segmentation plugin☆31Updated 4 years ago
- website for the napari image viewer☆44Updated this week
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- StarDist plugin for napari☆39Updated last year
- A library to facilitate machine learning on multi-dimensional images.☆86Updated last week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆56Updated 11 months ago
- python tools for BigDataViewer☆22Updated 9 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆68Updated last month
- A fully scalable robust image feature extraction library.☆25Updated last week