zeiss-microscopy / libCZI
Open Source Cross-Platform C++ library to read CZI image files
☆72Updated 2 years ago
Alternatives and similar repositories for libCZI:
Users that are interested in libCZI are comparing it to the libraries listed below
- Read and write life sciences file formats☆136Updated 6 months ago
- Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆132Updated last week
- Python module utilizing libCZI for reading Zeiss CZI files.☆37Updated 2 months ago
- libCZI is an Open Source Cross-Platform C++ library to read and write CZI.☆50Updated 3 weeks ago
- Cookiecutter for napari plugins☆69Updated 4 months ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆67Updated 5 months ago
- ☆69Updated last week
- QuPath - Open-source bioimage analysis for research☆49Updated this week
- Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy E…☆392Updated 2 weeks ago
- Multiple file format reading directly into napari using pure Python☆35Updated 8 months ago
- Bio-Formats image file format to raw format converter☆86Updated last week
- ImgLib2/BDV implementation of Stitching for large datasets☆73Updated last month
- native Python dataclasses for the OME data model☆55Updated 3 weeks ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆137Updated last month
- Browse your OMERO database from within napari.☆36Updated this week
- GPU-accelerated image processing for everyone☆51Updated 8 months ago
- StarDist plugin for ImageJ☆29Updated 2 years ago
- Automated mitochondrial segmentation and tracking.☆31Updated 3 years ago
- The ImageJ wiki☆27Updated this week
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆131Updated last month
- Accelerated Pixel and Object Classifiers (APOC)☆55Updated last month
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆133Updated last month
- ☆41Updated this week
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆15Updated 6 years ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆52Updated 5 months ago
- Easily read and write ome-tiff images in python☆26Updated 10 months ago
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆42Updated 6 months ago
- Create 3D/4D animations using a natural language-based syntax☆59Updated 2 years ago
- ☆35Updated last week