zeiss-microscopy / libCZI
Open Source Cross-Platform C++ library to read CZI image files
☆72Updated 2 years ago
Alternatives and similar repositories for libCZI
Users that are interested in libCZI are comparing it to the libraries listed below
Sorting:
- Python module utilizing libCZI for reading Zeiss CZI files.☆37Updated last month
- Read and write life sciences file formats☆139Updated 8 months ago
- Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆135Updated last month
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆139Updated 2 months ago
- Read Carl Zeiss image files (CZI).☆30Updated 2 months ago
- libCZI is an Open Source Cross-Platform C++ library to read and write CZI.☆51Updated 2 weeks ago
- ImgLib2/BDV implementation of Stitching for large datasets☆73Updated 2 weeks ago
- Accelerated Pixel and Object Classifiers (APOC)☆57Updated 2 months ago
- Multiple file format reading directly into napari using pure Python☆36Updated 9 months ago
- native Python dataclasses for the OME data model☆56Updated last week
- ☆71Updated last month
- GPU-accelerated image processing for everyone☆52Updated 10 months ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆67Updated 7 months ago
- Use ImageJ functionality from napari☆31Updated last month
- Bio-Formats image file format to raw format converter☆91Updated 3 weeks ago
- Create 3D/4D animations using a natural language-based syntax☆59Updated 2 years ago
- The ImageJ plugin to run deep-learning models☆92Updated this week
- ☆41Updated this week
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆71Updated this week
- Browse your OMERO database from within napari.☆37Updated this week
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 3 weeks ago
- ☆35Updated last week
- Read and write ImageJ ROI format.☆72Updated this week
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆137Updated last week
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆34Updated last month
- Automated mitochondrial segmentation and tracking.☆31Updated 3 years ago
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆42Updated 8 months ago
- A napari plugin for zarr backed OME-NGFF images☆33Updated last week
- The ImageJ wiki☆27Updated 3 weeks ago
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆27Updated 11 months ago