Variant Caller Analysis Dashboard and Data Management System
☆36Feb 8, 2016Updated 10 years ago
Alternatives and similar repositories for cycledash
Users that are interested in cycledash are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- EXPERIMENTAL implementation of side graph☆10Apr 16, 2015Updated 10 years ago
- A VCF parser and variant record model in JavaScript.☆22Mar 4, 2017Updated 9 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- ☆12Feb 19, 2017Updated 9 years ago
- Interactive in-browser track viewer☆280Oct 26, 2021Updated 4 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- vgraph is a command line application and Python library to compare genetic variants using variant graphs. ``vgraph`` utilizes a graph re…☆43Sep 16, 2021Updated 4 years ago
- Probabilistic HLA typing☆35Aug 31, 2019Updated 6 years ago
- ☆36Aug 13, 2020Updated 5 years ago
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago
- laSV is a software package that employs local assembly to detect structural variations from whole-genome high-throughput sequencing datas…☆12Sep 26, 2016Updated 9 years ago
- Application for inferring subclonal composition and evolution from whole-genome sequencing data.☆114Oct 12, 2022Updated 3 years ago
- Visualizing genetic sequence variation☆14Apr 27, 2020Updated 5 years ago
- ☆15Mar 7, 2016Updated 10 years ago
- An algorithm for clonal tree reconstruction from multi-sample cancer sequencing data☆14Apr 1, 2018Updated 8 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Consensus assembly and variant calling workflow.☆12May 26, 2015Updated 10 years ago
- ☆45Jul 7, 2016Updated 9 years ago
- Generate and process BAM files from Illumina sequencing instrument files☆23Feb 25, 2016Updated 10 years ago
- Web client for CIViC: Clinical Interpretations of Variants in Cancer☆50Nov 28, 2023Updated 2 years ago
- Build components for CloudMan, Galaxy on the Cloud, or Galaxy Server☆20Jun 27, 2017Updated 8 years ago
- Standalone C library for assembling Illumina short reads in small regions☆72Dec 15, 2022Updated 3 years ago
- Scripts for implementing read until and other examples.☆31Feb 25, 2020Updated 6 years ago
- Population Reference Graphs for the HLA and MHC.☆35Dec 18, 2018Updated 7 years ago
- VariantToolChest (VTC) is intended to be a powerful tool chest to analyze VCF files. I encourage anyone to contribute their tools and hel…☆25Apr 8, 2016Updated 10 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A configurable de novo assembly pipeline☆29Jun 29, 2016Updated 9 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- Read visualizer for structural variants☆84Aug 18, 2018Updated 7 years ago
- Gene Exploration System for Variance☆22Dec 8, 2022Updated 3 years ago
- GenomicsDB☆109Jan 3, 2023Updated 3 years ago
- ☆30Oct 6, 2021Updated 4 years ago
- Library for manipulating genomic variants and predicting their effects☆86Updated this week
- De novo assembly based variant calling pipeline for Illumina short reads☆110Nov 30, 2020Updated 5 years ago
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆16Aug 9, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Hemang Parikh☆11Jan 12, 2016Updated 10 years ago
- Docker containers that demonstrate a proof of concept bwa alignment workflow☆14Jan 13, 2015Updated 11 years ago
- VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files☆37Nov 19, 2019Updated 6 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Apr 8, 2016Updated 10 years ago
- Browser for ExAC consortium data☆106Jan 21, 2022Updated 4 years ago
- A python tool for parsing pedigree files☆16Aug 29, 2017Updated 8 years ago
- create a gemini-compatible database from a VCF☆55Jan 5, 2021Updated 5 years ago