dasmoth / dalliance
Interactive web-based genome browser.
☆227Updated 5 years ago
Alternatives and similar repositories for dalliance:
Users that are interested in dalliance are comparing it to the libraries listed below
- miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.☆182Updated 6 years ago
- HGVS variant name parsing and generation☆174Updated last year
- ☆272Updated 2 months ago
- BEDOPS: high-performance genomic feature operations☆330Updated last week
- This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.☆241Updated 2 years ago
- Extension for Jupyter which integrates igv.js☆154Updated 2 years ago
- Plot structural variant signals from many BAMs and CRAMs☆541Updated 9 months ago
- A tool set for short variant discovery in genetic sequence data.☆196Updated 4 years ago
- annotate a VCF with other VCFs/BEDs/tabixed files☆375Updated last year
- Text Only Genome Viewer!☆221Updated last month
- Browser for ExAC consortium data☆106Updated 3 years ago
- A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.☆160Updated last week
- Count bases in BAM/CRAM files☆315Updated 3 years ago
- An ensemble approach to accurately detect somatic mutations using SomaticSeq☆196Updated 3 weeks ago
- GFF and GVF specification documents☆213Updated 10 months ago
- VarDict☆198Updated last year
- List of gene lists for genomic analyses.☆219Updated 2 years ago
- A genome browser designed for complex structural variants and long reads.☆282Updated 2 months ago
- A powerful toolset for genome arithmetic.☆141Updated 3 years ago
- Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")☆319Updated last month
- Simple FASTQ quality assessment using Python☆108Updated 3 years ago
- GRIDSS: the Genomic Rearrangement IDentification Software Suite☆268Updated last year
- Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data☆209Updated 4 years ago
- HTML5 scrollable genome browser☆109Updated last year
- Rapid Mapping-based Isoform Quantification from RNA-Seq Reads☆126Updated 2 years ago
- Variant calling and somatic mutation/CNV detection for next-generation sequencing data☆158Updated 2 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- a toolkit for working with Oxford nanopore data☆242Updated 2 years ago
- Library for manipulating genomic variants and predicting their effects☆84Updated 10 months ago
- de novo sequence assembler using string graphs☆241Updated 5 years ago