iobio / minionLinks
Server wrapper that turns command line tools into web services
☆60Updated 7 years ago
Alternatives and similar repositories for minion
Users that are interested in minion are comparing it to the libraries listed below
Sorting:
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆99Updated 8 years ago
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆77Updated 2 months ago
- A fast Python library for VCF files leveraging Cython for speed.☆52Updated 7 years ago
- Workflow Description Language compiler for the DNAnexus platform☆42Updated 2 years ago
- Toil workflows for common genomic pipelines☆33Updated 6 years ago
- Browser for ExAC consortium data☆106Updated 4 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated this week
- De novo assembly based variant calling pipeline for Illumina short reads☆110Updated 5 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆98Updated 2 years ago
- conda recipes for genomic data☆84Updated 4 years ago
- Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)☆86Updated 8 years ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆47Updated 3 months ago
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆71Updated this week
- The gkno launcher for executing tools or pipelines☆31Updated 9 years ago
- Flexible genotype query among 30,000+ samples whole-genome☆94Updated 6 years ago
- CRAM format specification and java API for read data.☆59Updated 7 years ago
- An iobio app for examining gene variants☆20Updated 7 years ago
- MyVariant.info: A BioThings API for human variant annotations☆98Updated 5 months ago
- Scalable RNA-seq analysis☆73Updated 5 years ago
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- Request for comments on interchangeable bioinformatics containers☆39Updated 6 years ago
- https://bam.iobio.io☆47Updated 2 weeks ago
- GA4GH Variation Representation Python Implementation☆61Updated this week
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 7 years ago
- A genotype query interface.☆136Updated 4 years ago
- Standalone C library for assembling Illumina short reads in small regions☆72Updated 3 years ago
- Fast spliced aligner with low memory requirements☆41Updated 10 years ago
- ☆28Updated 4 months ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆85Updated last month
- NextSeq specific bcl2fastq2 wrapper.☆55Updated 4 years ago