metabolomics-cloud / mummichogLinks
pathway and network analysis for metabolomics
☆43Updated last week
Alternatives and similar repositories for mummichog
Users that are interested in mummichog are comparing it to the libraries listed below
Sorting:
- ☆55Updated 4 years ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆50Updated 2 years ago
- ☆26Updated 2 years ago
- R package for optimized LC-MS spectra processing☆26Updated 2 weeks ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆28Updated 2 years ago
- TimsR: Easy access to timsTOF Pro data from R.☆12Updated 4 years ago
- asari, metabolomics data preprocessing☆55Updated 2 weeks ago
- Metabolome Annotation Workflow☆26Updated last month
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆30Updated 2 years ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆30Updated last year
- ☆12Updated 3 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆24Updated 6 months ago
- A collection of common mz values found in mass spectrometry.☆20Updated last year
- Assigning precursor-product ion relationships in indiscriminant MS/MS data☆13Updated last month
- Nextflow-powered MS-DIAL☆10Updated 11 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆49Updated 9 months ago
- Docker for MetaboAnalyst 4.0☆24Updated 5 years ago
- A Python interface to proteomics data repositories☆36Updated 6 months ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆30Updated 11 months ago
- ☆67Updated last year
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Updated 2 years ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆18Updated 2 years ago
- MS/MS prediction for peptides☆24Updated 5 years ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 3 years ago
- Workflow solutions for mass-spectrometry based non-target analysis.☆68Updated this week
- ☆14Updated 2 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆26Updated 2 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Updated last year
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆31Updated last year