Alternatives and similar repositories for funscoR

Users that are interested in funscoR are comparing it to the libraries listed below

• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated last year
• bigbio / ibaqpy
  Absolute quantification package based on quantms.io
  ☆16Updated 4 months ago
• masato-ogishi / Repitope
  Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.
  ☆25Updated 2 years ago
• jessegmeyerlab / proteomics-tutorial
  ☆68Updated last year
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆46Updated 2 years ago
• kentsislab / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆27Updated 7 years ago
• GreiffLab / immuneSIM
  ☆38Updated 2 years ago
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• metabolomics-cloud / mummichog
  pathway and network analysis for metabolomics
  ☆43Updated 2 months ago
• MannLabs / proteomesoflife
  python based queries for the proteomesoflife neo4j network database
  ☆14Updated 5 years ago
• kenichi-shimada / shinyDepMap
  A shiny-based web tool for interactive analysis of DepMap data
  ☆24Updated 4 years ago
• bigbio / qpx
  qpx (Quantitative Proteomics eXchange) format (aka quantms.io) a format to capture a full proteomics experiment
  ☆14Updated 2 weeks ago
• Vitek-Lab / MSstatsShiny
  R-Shiny GUI integrated with the MSstats package family
  ☆19Updated this week
• bigbio / quantms
  Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…
  ☆67Updated 2 weeks ago
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆24Updated 5 years ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆36Updated 7 months ago
• kmayerb / tcrdist3
  flexible CDR based distance metrics
  ☆69Updated last month
• Genentech / Absolve
  Absolve antibody variable domain sequence analysis
  ☆18Updated 7 years ago
• GfellerLab / PRIME
  PRedictor of IMmunogenic Epitopes
  ☆25Updated 4 months ago
• chenhcs / FRoGS
  Functional Embedding of Gene Signatures
  ☆48Updated last year
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆55Updated 4 months ago
• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆47Updated last month
• Pharmaco-OmicsLab / EasyPubPlot
  Shiny app to easily create publishable plots for scientific papers
  ☆39Updated 6 months ago
• fraenkel-lab / OmicsIntegrator2
  Prize-Collecting Steiner Forests for Interactomes
  ☆63Updated last year
• Huber-group-EMBL / NPARC
  Nonparametric Analysis of Response Curves from Thermal Proteome Profiling Experiments
  ☆13Updated 2 years ago
• MonashProteomics / FragPipe-Analyst
  Documentation is available here:
  ☆24Updated 2 months ago
• PayneLab / ProteomicsEducation
  ☆40Updated 2 weeks ago
• singha53-zz / diablo
  DIABLO - an integrative multi-group, multi-dataset classification method
  ☆26Updated 6 years ago
• nf-core / mhcquant
  Identify and quantify MHC eluted peptides from mass spectrometry raw data
  ☆44Updated last week
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆28Updated 2 years ago