R package for functionally scoring phosphorylation sites
☆23Nov 3, 2019Updated 6 years ago
Alternatives and similar repositories for funscoR
Users that are interested in funscoR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package for investigating the structural context of PTMs☆28Jan 9, 2025Updated last year
- Estimate PTM hotspots in protein sequence alignments☆15Feb 6, 2019Updated 7 years ago
- Analysis workflow for investigating the structural context of PTMs☆11Jan 8, 2024Updated 2 years ago
- PhosR is a package for the comprehensive analysis of phosphoproteomic data.☆20Sep 4, 2025Updated 7 months ago
- C++ lossless and lossy mass spectrometry compression☆14Sep 16, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- programs and scripts for molecular structure analysis☆11Mar 26, 2026Updated 2 weeks ago
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 5 years ago
- Screen interactions with AlphaFold Multimer☆14Mar 10, 2025Updated last year
- web based visualisation of CLMS data☆13Nov 22, 2022Updated 3 years ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Jun 1, 2022Updated 3 years ago
- ☆11Mar 23, 2022Updated 4 years ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆92Nov 17, 2025Updated 4 months ago
- Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure☆13Dec 17, 2025Updated 3 months ago
- ProXL Web App -- Visualize and Share Protein Cross-linking Data☆13Feb 23, 2026Updated last month
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆26Oct 2, 2025Updated 6 months ago
- Kinase Activity Predictions from shotgun proteomics☆13Apr 18, 2017Updated 8 years ago
- A knowledge resource on cell lines - From SIB CALIPHO group☆14Jan 31, 2024Updated 2 years ago
- The public repository for the Proteomic Data Commons UI and APIs☆17Feb 19, 2026Updated last month
- Core Utils for Mass Spectrometry Data☆17Updated this week
- Disease pathways in the human interactome☆22Mar 20, 2018Updated 8 years ago
- Code for the analyses in the human reference interactome paper.☆28Dec 8, 2022Updated 3 years ago
- Layered enrichment analysis tool enables facile enrichment using various statistics at once.☆18Mar 11, 2026Updated last month
- StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitat…☆13Mar 13, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- A repository of Python tips for common data science tasks, including dataset unit testing and machine learning development for production☆20Apr 10, 2022Updated 4 years ago
- Martini Workshop: Simulating a Minimal Bacterial Cell☆15May 13, 2024Updated last year
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Apr 2, 2026Updated last week
- ☆33Jun 1, 2024Updated last year
- An open-source Python package to unify raw MS data accession and storage.☆31Updated this week
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆33Mar 21, 2026Updated 3 weeks ago
- ☆15Jun 11, 2021Updated 4 years ago
- BLAST-Like Alignment Tool☆23Jan 11, 2019Updated 7 years ago
- Tutorial for STAR-Fusion, FusionInspector, and de novo reconstruction of fusion transcripts using Trinity☆14Nov 21, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Interactive tool for Phosphoproteomics☆14May 6, 2020Updated 5 years ago
- Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence☆11Jun 24, 2015Updated 10 years ago
- A community dedicated to education of computer coding applied to mass spectrometry applications.☆52Jul 18, 2025Updated 8 months ago
- Analytical R Tools for Mass Spectrometry☆14Oct 30, 2025Updated 5 months ago
- mist R package files☆10May 5, 2025Updated 11 months ago
- IPAW: a Nextflow workflow for proteogenomics☆29Aug 8, 2024Updated last year
- ☆17Feb 5, 2026Updated 2 months ago