evocellnet / funscoRLinks
R package for functionally scoring phosphorylation sites
☆22Updated 5 years ago
Alternatives and similar repositories for funscoR
Users that are interested in funscoR are comparing it to the libraries listed below
Sorting:
- Python package for investigating the structural context of PTMs☆28Updated 7 months ago
- Absolute quantification package based on quantms.io☆14Updated 2 months ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- ☆62Updated last year
- ☆38Updated last year
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆24Updated 2 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆52Updated last week
- MS/MS prediction for peptides☆24Updated 4 years ago
- Differential Expression Analysis tool box R lang package for omics data☆45Updated last month
- A Python interface to proteomics data repositories☆34Updated last month
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- python based queries for the proteomesoflife neo4j network database☆14Updated 5 years ago
- ☆55Updated 4 years ago
- pathway and network analysis for metabolomics☆42Updated last year
- DIABLO - an integrative multi-group, multi-dataset classification method☆24Updated 6 years ago
- ☆33Updated 2 weeks ago
- Functional Embedding of Gene Signatures☆46Updated last year
- Connectivity Map analysis in MATLAB☆46Updated 3 years ago
- Absolve antibody variable domain sequence analysis☆17Updated 6 years ago
- HLA-II ligand predictor.☆44Updated 2 years ago
- A shiny-based web tool for interactive analysis of DepMap data☆23Updated 4 years ago
- Docker for MetaboAnalyst 4.0☆24Updated 4 years ago
- Python client for PRIDE Archive Rest API.☆24Updated 3 months ago
- DEqMS is a tool for quantitative proteomic analysis☆23Updated 3 months ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆15Updated 3 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆19Updated this week
- Immunoglobulin and T-Cell receptor rearrangement software☆49Updated last year
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆47Updated last year
- Fast and flexible semi-supervised learning for peptide detection in Python☆47Updated 5 months ago