Alternatives and similar repositories for MetabolomicsTools

Users that are interested in MetabolomicsTools are comparing it to the libraries listed below

• LiChenPU / NetID
  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
  ☆50Updated 2 years ago
• metabolomics-cloud / mummichog
  pathway and network analysis for metabolomics
  ☆43Updated 2 weeks ago
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆28Updated 2 years ago
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆26Updated this week
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆30Updated 2 years ago
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆56Updated 3 weeks ago
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆26Updated last month
• bigbio / proteomics-sample-metadata
  The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets
  ☆98Updated 3 months ago
• MSGFPlus / msgfplus
  MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …
  ☆82Updated 2 months ago
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆94Updated last year
• rickhelmus / patRoon
  Workflow solutions for mass-spectrometry based non-target analysis.
  ☆68Updated this week
• msproteomicstools / msproteomicstools
  Some hopefully useful tools for mass spectrometry applied to proteomics
  ☆53Updated 4 years ago
• systemsomicslab / mtbinfo.github.io
  ☆30Updated last year
• fgcz / rawrr
  Access Orbitrap data in R lang using C# .NET assembly - bioconductor package
  ☆58Updated 3 months ago
• zhengfj1994 / MetEx
  MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.
  ☆18Updated 2 years ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆12Updated 4 years ago
• jessegmeyerlab / proteomics-tutorial
  ☆67Updated last year
• IFIproteomics / LFQbench
  ☆24Updated 2 years ago
• eMetaboHUB / MS-CleanR
  ☆26Updated 2 years ago
• kevinkovalchik / RawTools
  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…
  ☆67Updated 2 weeks ago
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆24Updated 6 months ago
• HUPO-PSI / mzTab
  mzTab Reporting MS-based Proteomics and Metabolomics Results
  ☆43Updated 8 months ago
• CompOmics / moFF
  A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file
  ☆33Updated 4 years ago
• tvpham / iq
  An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics
  ☆32Updated 2 months ago
• ZhuMetLab / MetDNA2
  Knowledge-guided multilayer network approach is executed in MetDNA2
  ☆16Updated 3 years ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆49Updated 10 months ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆30Updated last year
• workflow4metabolomics / tools-metabolomics
  Galaxy tools for metabolomics maintained by Workflow4Metabolomics
  ☆30Updated 3 months ago
• HaoGroup-ProtContLib / Protein-Contaminant-Libraries-for-DDA-and-DIA-Proteomics
  This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…
  ☆31Updated last year
• Functional-Metabolomics-Lab / FBMN-STATS
  FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks
  ☆42Updated 6 months ago