RASpicer / MetabolomicsTools

Related projects ⓘ

Alternatives and complementary repositories for MetabolomicsTools

• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆26Updated last year
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆38Updated 5 months ago
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆32Updated last year
• LiChenPU / NetID
  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
  ☆44Updated last year
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆42Updated this week
• eMetaboHUB / MS-CleanR
  ☆25Updated 11 months ago
• rickhelmus / patRoon
  Workflow solutions for mass-spectrometry based non-target analysis.
  ☆64Updated this week
• jessegmeyerlab / proteomics-tutorial
  ☆54Updated 6 months ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆27Updated 4 months ago
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆22Updated this week
• jaspershen / metID
  Construct database and identify metabolites.
  ☆3Updated 2 years ago
• Vitek-Lab / MSstats
  R package - MSstats
  ☆74Updated this week
• Functional-Metabolomics-Lab / FBMN-STATS
  FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks
  ☆32Updated last month
• kentsisresearchgroup / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆26Updated 6 years ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆9Updated 3 years ago
• HaoGroup-ProtContLib / Protein-Contaminant-Libraries-for-DDA-and-DIA-Proteomics
  This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…
  ☆23Updated 5 months ago
• bigbio / proteomics-sample-metadata
  The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets
  ☆78Updated last month
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆19Updated 5 months ago
• bigbio / quantms
  Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…
  ☆34Updated this week
• ZhuMSLab / DecoMetDIA
  ☆10Updated 2 years ago
• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆40Updated 3 weeks ago
• cbielow / PTXQC
  A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant
  ☆42Updated 8 months ago
• DorresteinLaboratory / XCMS3_FeatureBasedMN
  ☆12Updated 2 years ago
• IFIproteomics / LFQbench
  ☆24Updated last year
• ftwkoopmans / msdap
  MS-DAP: downstream analysis pipeline for quantitative proteomics
  ☆31Updated last month
• pFindStudio / pFind3
  ☆24Updated 5 years ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆25Updated last year
• CCMS-UCSD / GNPS_Workflows
  Public Workflows at GNPS
  ☆54Updated 9 months ago
• statisticalbiotechnology / diffacto
  ☆13Updated 8 months ago
• MSGFPlus / msgfplus
  MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …
  ☆77Updated 7 months ago