Alternatives and similar repositories for gdscIC50

Users that are interested in gdscIC50 are comparing it to the libraries listed below

• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆52Updated 2 weeks ago
• CancerRxGene / gdsctools
  Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )
  ☆36Updated 3 years ago
• francescojm / ADAM
  Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens
  ☆23Updated 6 years ago
• fperraudeau / singlecellworkflow
  Tutorial for the analysis of scRNA-seq data in R
  ☆18Updated 7 years ago
• UCLouvain-CBIO / depmap
  Cancer Dependency Map package
  ☆30Updated last year
• interactivereport / Quickomics
  Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.
  ☆42Updated last month
• bhklab / Xeva
  XEnograft Visualization & Analysis
  ☆11Updated last month
• greenelab / RNAseq_titration_results
  Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously
  ☆37Updated 2 years ago
• KaiAragaki / tidyestimate
  ESTIMATE tumor infiltration, the tidy way
  ☆16Updated 2 years ago
• ELELAB / MoonlightR
  ☆17Updated last year
• GSEA-MSigDB / ssGSEA-gpmodule
  A GenePattern module for running the ssGSEA method
  ☆13Updated 7 months ago
• uc-bd2k / GREP2
  GEO RNA-seq Experiments Processing Pipeline
  ☆21Updated 5 years ago
• broadinstitute / mix_seq_ms
  Code associated with MIX-seq manuscript
  ☆15Updated 5 years ago
• TomKellyGenetics / graphsim
  R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
  ☆24Updated 4 months ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 6 years ago
• liuhong-jia / scAnno
  ☆25Updated 4 months ago
• stephaniehicks / methylCC
  R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms
  ☆18Updated 2 years ago
• lkmklsmn / insct
  scRNAseq integration with triplet neural networks
  ☆41Updated 2 years ago
• slowkow / cellguide
  🧭 Navigate single-cell RNA-seq datasets in your web browser.
  ☆29Updated 2 years ago
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆22Updated 4 years ago
• kuijjerlab / retriever
  Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data
  ☆15Updated 3 years ago
• hms-dbmi / dseqr
  single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.
  ☆20Updated 11 months ago
• AstraZeneca / Omicsfold
  Multi-omics data normalisation, model fitting and visualisation.
  ☆28Updated 2 years ago
• montilab / BS831
  Course Materials for Genomics Data Mining
  ☆22Updated 2 weeks ago
• broadinstitute / single_cell_classification
  Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles
  ☆29Updated 5 years ago
• LTLA / scRNAseq
  Clone of the Bioconductor repository for the scRNAseq package.
  ☆29Updated 8 months ago
• Novartis / DRUG-seq
  DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline
  ☆33Updated 6 months ago
• icbi-lab / immune_deconvolution_benchmark
  Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…
  ☆43Updated 5 years ago
• myles-lewis / glmmSeq
  Gene-level general linear mixed model
  ☆23Updated this week
• Pinlyu3 / CellAnn_shinyapp
  CellAnn
  ☆12Updated last year