ashapsoncoe / h01
☆13Updated 9 months ago
Alternatives and similar repositories for h01:
Users that are interested in h01 are comparing it to the libraries listed below
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆9Updated last week
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆23Updated 2 weeks ago
- Read and write Neuroglancer datasets programmatically.☆137Updated last week
- Connectome Reconstruction and Exploration Simple Tool☆17Updated 11 months ago
- 🌈☆53Updated last year
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆25Updated 3 weeks ago
- ☆35Updated 2 months ago
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆13Updated this week
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆13Updated 5 months ago
- ☆10Updated last month
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆34Updated 7 months ago
- Command line tool for registration of very large 3D volumes.☆13Updated last year
- SharkViewer is a web-based viewer for SWC neuron files. It is written entirely in JavaScript using Three.js.☆24Updated 2 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆45Updated this week
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆119Updated last month
- Deep Learning for EM Connectomics☆14Updated 2 years ago
- WebGL-based viewer for volumetric data☆23Updated this week
- Collection of connectomic papers and datasets.☆14Updated last year
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆40Updated 6 months ago
- Python client utilties for interacting with the neuPrint connectome analysis service☆31Updated last month
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆18Updated 3 years ago
- End-to-end light-sheet image analysis for mouse brains, with DL training data generated in VR☆30Updated 5 months ago
- MorphoFeatures code and data☆19Updated last year
- Simple watershed and agglomeration library for affinity graphs.☆19Updated 2 months ago
- Tools for distributed alignment of massive images☆78Updated this week
- Block-wise task scheduling for large nD volumes.☆28Updated 2 months ago
- Automated 3D brain registration with support for multiple species and atlases.☆128Updated this week
- Shared repo for EM connectomics and Array Tomography render based image processing modules☆14Updated this week
- A library to facilitate machine learning on multi-dimensional images.☆81Updated last month
- Flood filling networks for segmenting electron microscopy of neural tissue☆23Updated 2 years ago