Alternatives and similar repositories for microviewer:

Users that are interested in microviewer are comparing it to the libraries listed below

• seung-lab / fastmorph
  Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.
  ☆15Updated 2 weeks ago
• CAVEconnectome / PyChunkedGraph
  Data backend for fast proofreading of cell segmentations in connectomics datasets
  ☆23Updated this week
• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆48Updated last week
• seung-lab / corgie
  Command line tool for registration of very large 3D volumes.
  ☆14Updated last year
• YuelongWu / feabas
  Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data
  ☆16Updated this week
• ZettaAI / zetta_utils
  ☆11Updated this week
• CAVEconnectome / MeshParty
  ☆36Updated last month
• seung-lab / fastremap
  Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
  ☆54Updated this week
• seung-lab / chunkflow
  Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation
  ☆51Updated 5 months ago
• seung-lab / cloud-volume
  Read and write Neuroglancer datasets programmatically.
  ☆146Updated 2 weeks ago
• funkelab / lsd
  🌈
  ☆55Updated last month
• constantinpape / cluster_tools
  Distributed segmentation for bio-image-analysis
  ☆37Updated this week
• seung-lab / neuroglancer
  WebGL-based viewer for volumetric data
  ☆23Updated last week
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆30Updated last month
• CAVEconnectome / CAVEclient
  This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.
  ☆27Updated this week
• reimerlab / NEURD
  NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions
  ☆13Updated this week
• CAVEconnectome / nglui
  ☆12Updated last month
• seung-lab / zmesh
  Marching Cubes & Mesh Simplification on multi-label 3D images.
  ☆62Updated last month
• seung-lab / DeepEM
  Deep Learning for EM Connectomics
  ☆14Updated 2 years ago
• aschampion / diluvian
  Flood filling networks for segmenting electron microscopy of neural tissue
  ☆23Updated 2 years ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆54Updated last week
• subeeshvasu / Awesome-Neuron-Segmentation-in-EM-Images
  A curated list of resources for 3D segmentation of neurites in EM images
  ☆49Updated last year
• BlueBrain / Ultraliser
  Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight i…
  ☆28Updated 4 months ago
• google-research / sofima
  Scalable Optical Flow-based Image Montaging and Alignment
  ☆69Updated 2 months ago
• ilastik / nature_methods_multicut_pipeline
  ☆20Updated 4 years ago
• arttumiettinen / pi2
  C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
  ☆54Updated last month
• jhuapl-boss / intern
  Python SDK for interacting with the BossDB REST API
  ☆21Updated 2 weeks ago
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆82Updated 3 weeks ago
• seung-lab / cloud-files
  Threaded Python and CLI client library for AWS S3, Google Cloud Storage (GCS), in-memory, and the local filesystem.
  ☆42Updated this week
• navis-org / fafbseg-py
  Tools to work with the FlyWire connectome. Fully interoperable with navis.
  ☆13Updated 3 weeks ago