Alternatives and similar repositories for MorphoFeatures

Users that are interested in MorphoFeatures are comparing it to the libraries listed below

• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆57Updated 3 weeks ago
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated 3 weeks ago
• funkelab / motile
  Multi-Object Tracker using Integer Linear Equations
  ☆37Updated this week
• Sentinal4D / cellshape
  3D shape analysis using deep learning
  ☆26Updated last year
• weigertlab / trackastra
  Transformer-based cell tracking for live-cell microscopy
  ☆82Updated last week
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated 6 months ago
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆32Updated 4 months ago
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated last year
• abcucberkeley / PetaKit5D
  ☆46Updated last week
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆87Updated last week
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated 3 months ago
• stegmaierj / Cellpose3D
  3D Extension of the Cellpose Algorithm by Stringer et al., 2021.
  ☆35Updated 2 years ago
• kirchhausenlab / incasem
  Automated Segmentation of cellular substructures in Electron Microscopy
  ☆17Updated 5 months ago
• Kapoorlabs-CAPED / VollSeg
  Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…
  ☆33Updated 2 weeks ago
• MouseLand / cellpose-napari
  napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
  ☆55Updated 10 months ago
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆86Updated 2 weeks ago
• royerlab / ultrack
  Cell tracking and segmentation software
  ☆134Updated last week
• baigouy / EPySeg
  ☆20Updated last year
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆23Updated 2 months ago
• haesleinhuepf / human-eval-bia
  Benchmarking Large Language Models for Bio-Image Analysis Code Generation
  ☆23Updated 9 months ago
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆56Updated last month
• stardist / augmend
  simple package for augmentation of n-dimensional arrays
  ☆33Updated 2 years ago
• janelia-cellmap / fibsem-tools
  Tools for handling FIB-SEM data and annotations
  ☆22Updated 4 months ago
• nadavyayon / Intensify3D
  Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…
  ☆19Updated 4 years ago
• AllenCell / aics-ml-segmentation
  ☆32Updated 3 weeks ago
• napari / napari-animation
  A napari plugin for making animations
  ☆87Updated last month
• fmi-basel / LSTree
  LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.
  ☆19Updated 2 years ago
• kreshuklab / go-nuclear
  Guides and code for 3D nuclear instance segmentation
  ☆22Updated 2 months ago
• stardist / stardist-napari
  StarDist plugin for napari
  ☆40Updated last year
• uhlmanngroup / splinedist
  SplineDist: Automated Cell Segmentation with Spline Curves
  ☆67Updated 10 months ago