Collection of connectomic papers and datasets.
☆16Dec 25, 2023Updated 2 years ago
Alternatives and similar repositories for connectomic-paper-datasets
Users that are interested in connectomic-paper-datasets are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆25Feb 24, 2026Updated 2 months ago
- DCEN☆13Aug 12, 2021Updated 4 years ago
- Biologically-Constrained Graphs for Global Connectomics Reconstruction☆11Feb 9, 2021Updated 5 years ago
- A curated list of resources for 3D segmentation of neurites in EM images☆57Mar 11, 2024Updated 2 years ago
- Open source volume electron microscopy (vEM) datasets for connectomics.☆17Nov 13, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆72Apr 24, 2026Updated 2 weeks ago
- CrossSDF: 3D Reconstruction of Thin Structures From Cross-Sections, CVPR 2025☆11Aug 1, 2025Updated 9 months ago
- Connectome Reconstruction and Exploration Simple Tool☆21Jan 29, 2024Updated 2 years ago
- ☆15Oct 17, 2024Updated last year
- A basis for a napari plugin for manually correcting cell segmentation in 3D (z, y, x) or 4D (t, z, y, x) (virtual) arrays.☆10Mar 6, 2026Updated 2 months ago
- ☆18Apr 7, 2025Updated last year
- Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for …☆39Apr 28, 2026Updated last week
- ☆21Oct 16, 2023Updated 2 years ago
- Annotations for the FlyWire dataset.☆44Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Semi-Supervised Neuron Segmentation via Reinforced Consistency Learning☆32May 28, 2022Updated 3 years ago
- Explore the FlyWire Connectome☆71Jun 3, 2025Updated 11 months ago
- Code to the paper "Self-Supervised Graph Representation Learning for Neuronal Morphologies"☆17Apr 5, 2024Updated 2 years ago
- PyTorch implementation for our ICCV 2023 paper Not Every Side Is Equal: Localization Uncertainty Estimation for Semi-Supervised 3D Object…☆13May 27, 2024Updated last year
- ☆11Aug 5, 2024Updated last year
- ☆12Feb 7, 2018Updated 8 years ago
- Deep Learning for EM Connectomics☆16Aug 18, 2022Updated 3 years ago
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Mar 6, 2026Updated 2 months ago
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Jun 23, 2021Updated 4 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Using color jitter to distinguish individuals in categorically colored visualizations☆11Apr 17, 2024Updated 2 years ago
- ☆53Updated this week
- Block-wise operations for large nD volumes☆45Updated this week
- Code for <Domain Adaptive Video Semantic Segmentation via Cross-Domain Moving Object Mixing> in WACV 2023☆12Jan 26, 2023Updated 3 years ago
- ☆12Mar 25, 2022Updated 4 years ago
- ☆42Sep 1, 2025Updated 8 months ago
- ☆16Jun 15, 2023Updated 2 years ago
- Code for GEM3D: Generative Medial Abstractions for 3D Shape Synthesis☆33Oct 16, 2024Updated last year
- ☆10Apr 5, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Jun 13, 2024Updated last year
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated 2 weeks ago
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆15May 1, 2026Updated last week
- Uncertainty-Aware Label Rectification for Domain Adaptive Mitochondria Segmentation in MICCAI 2021☆14Jun 22, 2021Updated 4 years ago
- serve Zarr datasets via HTTP☆31Jun 12, 2023Updated 2 years ago
- Tensorflow and Pytorch Version of Malis Loss☆17Nov 8, 2020Updated 5 years ago
- Medial axis transform using Delaunay triangulations☆12May 11, 2022Updated 3 years ago