A collection of notebooks to provide examples of using Microns-explorer.org datasets
☆42May 30, 2024Updated 2 years ago
Alternatives and similar repositories for MicronsBinder
Users that are interested in MicronsBinder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆43Sep 1, 2025Updated 10 months ago
- ☆13Jun 17, 2026Updated 2 weeks ago
- Tools for working with single-neuron morphological reconstructions☆22Apr 16, 2026Updated 2 months ago
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆27Feb 24, 2026Updated 4 months ago
- Code to the paper "Self-Supervised Graph Representation Learning for Neuronal Morphologies"☆18Apr 5, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- QC and cell type assignment for patch-seq transcriptomics data☆25May 3, 2024Updated 2 years ago
- Connectome-constrained Latent Variable Model of Whole-brain Neural Activity, ICLR 2022☆18Apr 26, 2022Updated 4 years ago
- Read and write Neuroglancer datasets programmatically.☆174Jun 4, 2026Updated last month
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆68May 27, 2026Updated last month
- Analysis of smFISH data☆12Aug 27, 2018Updated 7 years ago
- A curated list of awesome Janelia software☆17Feb 26, 2025Updated last year
- BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome☆10May 13, 2022Updated 4 years ago
- ☆12May 16, 2023Updated 3 years ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆27Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Phenotypic variation of transcriptomic cell types in mouse motor cortex☆28Oct 4, 2021Updated 4 years ago
- ☆16Nov 2, 2016Updated 9 years ago
- ☆61Updated this week
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆37Jun 18, 2026Updated 2 weeks ago
- computes intrinsic cell features from intracellular electrophysiology data☆30Dec 10, 2025Updated 6 months ago
- Python client utilties for interacting with the neuPrint connectome analysis service☆38May 23, 2026Updated last month
- A Python package to download neuronal morphologies☆17Jun 2, 2026Updated last month
- Scripts related to VISp and ALM scRNA-seq and FISH analysis for Tasic, et al., 2018.☆24Jun 15, 2018Updated 8 years ago
- Conversion of neuroimaging data for display in Neuroglancer☆31Sep 16, 2025Updated 9 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 5 years ago
- Legacy project superseded by https://github.com/morphonets/SNT☆13Jul 19, 2021Updated 4 years ago
- manually align specimens to annotated 3D spaces☆21May 10, 2023Updated 3 years ago
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆54Jun 20, 2025Updated last year
- ☆11Feb 18, 2019Updated 7 years ago
- Scripts for building, training and validating CNNs for Connectomics☆12Mar 24, 2023Updated 3 years ago
- The Blue Brain Pythonic Simulation and Network Analysis Productivity layer☆21Feb 26, 2025Updated last year
- WebGL-based viewer for volumetric data☆1,341Updated this week
- Distributed, Versioned, Image-oriented Dataservice☆202Jun 22, 2026Updated 2 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Meta-learning local synaptic plasticity for continual familiarity detection☆16Oct 25, 2022Updated 3 years ago
- Genearlized mapping scripts for RNA-seq and Patch-seq data☆19Sep 29, 2025Updated 9 months ago
- A portal for viewing FIB-SEM datasets☆13May 13, 2026Updated last month
- ☆15Jun 18, 2024Updated 2 years ago
- ☆12Mar 18, 2024Updated 2 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.☆19Jun 14, 2022Updated 4 years ago