Tools to work with the FlyWire connectome. Fully interoperable with navis.
☆21Feb 20, 2026Updated last month
Alternatives and similar repositories for fafbseg-py
Users that are interested in fafbseg-py are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python library for analysis of neuroanatomical data.☆114Mar 21, 2026Updated 3 weeks ago
- ☆33Apr 7, 2026Updated last week
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆15Dec 5, 2025Updated 4 months ago
- Biologically-Constrained Graphs for Global Connectomics Reconstruction☆11Feb 9, 2021Updated 5 years ago
- WebGL-based viewer for volumetric data☆25Apr 7, 2026Updated last week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆41Sep 1, 2025Updated 7 months ago
- Annotations for the FlyWire dataset.☆42Oct 14, 2025Updated 6 months ago
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆35Mar 18, 2026Updated 3 weeks ago
- Python library to interface with CATMAID servers. Fully interoperable with navis.☆24Mar 19, 2025Updated last year
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆23Feb 24, 2026Updated last month
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆24Apr 5, 2026Updated last week
- SharkViewer is a web-based viewer for SWC neuron files. It is written entirely in JavaScript using Three.js.☆24Jan 8, 2023Updated 3 years ago
- Block-wise task scheduling for large nD volumes.☆33Mar 17, 2026Updated 3 weeks ago
- Read and write Neuroglancer datasets programmatically.☆171Mar 31, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An interactive computing platform for studying the function of executable circuits constructed from fly brain data.☆46Sep 29, 2025Updated 6 months ago
- Python scripts to read and write the CREMI hdf5 file format.☆39Mar 21, 2023Updated 3 years ago
- Information and python tools for the GridTape-TEM dataset of an adult female fly's Brain And Nerve Cord☆17Mar 4, 2026Updated last month
- Mesh generation from sparse matrices☆23Nov 5, 2025Updated 5 months ago
- PyTorch Implementation of Global Neuron Shape Reasoning with Point Affinity Transformers☆13Mar 16, 2026Updated 3 weeks ago
- Distributed Gradient-Domain Processing of Planar and Spherical Images☆26Dec 30, 2020Updated 5 years ago
- A connectome-constrained deep mechanistic network (DMN) model of the fruit fly visual system in PyTorch.☆112Mar 26, 2026Updated 3 weeks ago
- Shared repo for EM connectomics and Array Tomography render based image processing modules☆17Mar 2, 2026Updated last month
- ☆15Mar 26, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆67Mar 17, 2026Updated 3 weeks ago
- ☆52Apr 3, 2026Updated last week
- Connectome Reconstruction and Exploration Simple Tool☆20Jan 29, 2024Updated 2 years ago
- ☆16Jan 23, 2024Updated 2 years ago
- Python SDK for interacting with the BossDB REST API☆23Apr 18, 2025Updated 11 months ago
- Conversion of neuroimaging data for display in Neuroglancer☆31Sep 16, 2025Updated 7 months ago
- Explore the FlyWire Connectome☆71Jun 3, 2025Updated 10 months ago
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Oct 22, 2025Updated 5 months ago
- Geometry-preserving Adaptive Mesher☆35Sep 3, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- scripts for using spark on janelia's cluster☆12Nov 12, 2023Updated 2 years ago
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Jun 23, 2021Updated 4 years ago
- Distributed, Versioned, Image-oriented Dataservice☆201Updated this week
- ☆12Mar 25, 2022Updated 4 years ago
- A library to facilitate machine learning on multi-dimensional images.☆89Apr 6, 2026Updated last week
- Flood filling networks for segmenting electron microscopy of neural tissue☆25Dec 26, 2022Updated 3 years ago
- Computes the alpha complex of a point set in any dimension☆14Mar 10, 2015Updated 11 years ago