Tools to work with the FlyWire connectome. Fully interoperable with navis.
☆24May 21, 2026Updated last month
Alternatives and similar repositories for fafbseg-py
Users that are interested in fafbseg-py are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python library for analysis of neuroanatomical data.☆115Jun 28, 2026Updated last week
- ☆33Jun 20, 2026Updated 2 weeks ago
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆15May 6, 2026Updated 2 months ago
- WebGL-based viewer for volumetric data☆25Jun 12, 2026Updated 3 weeks ago
- Annotations for the FlyWire dataset.☆47May 4, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆37Jun 18, 2026Updated 2 weeks ago
- Python library to interface with CATMAID servers. Fully interoperable with navis.☆24Mar 19, 2025Updated last year
- ☆43Sep 1, 2025Updated 10 months ago
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆27Feb 24, 2026Updated 4 months ago
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆26Jun 17, 2026Updated 3 weeks ago
- SharkViewer is a web-based viewer for SWC neuron files. It is written entirely in JavaScript using Three.js.☆24Jan 8, 2023Updated 3 years ago
- Block-wise task scheduling for large nD volumes.☆32May 4, 2026Updated 2 months ago
- An interactive computing platform for studying the function of executable circuits constructed from fly brain data.☆49Sep 29, 2025Updated 9 months ago
- Read and write Neuroglancer datasets programmatically.☆174Jun 4, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python scripts to read and write the CREMI hdf5 file format.☆39Mar 21, 2023Updated 3 years ago
- Information and python tools for the GridTape-TEM dataset of an adult female fly's Brain And Nerve Cord☆21May 16, 2026Updated last month
- Scalable Optical Flow-based Image Montaging and Alignment☆96Updated this week
- Mesh generation from sparse matrices☆23Updated this week
- PyTorch Implementation of Global Neuron Shape Reasoning with Point Affinity Transformers☆14Mar 16, 2026Updated 3 months ago
- Distributed Gradient-Domain Processing of Planar and Spherical Images☆26Dec 30, 2020Updated 5 years ago
- A connectome-constrained deep mechanistic network (DMN) model of the fruit fly visual system in PyTorch.☆122Mar 26, 2026Updated 3 months ago
- Shared repo for EM connectomics and Array Tomography render based image processing modules☆17Mar 2, 2026Updated 4 months ago
- ☆15Mar 26, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆68May 27, 2026Updated last month
- ☆22Jan 6, 2026Updated 6 months ago
- Connectome Reconstruction and Exploration Simple Tool☆21Jan 29, 2024Updated 2 years ago
- Python SDK for interacting with the BossDB REST API☆23Apr 18, 2025Updated last year
- This repository describes how to access the fly connectome from FlyWire.☆21Apr 9, 2024Updated 2 years ago
- Conversion of neuroimaging data for display in Neuroglancer☆31Sep 16, 2025Updated 9 months ago
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Apr 18, 2026Updated 2 months ago
- Explore the FlyWire Connectome☆77Jun 3, 2025Updated last year
- scripts for using spark on janelia's cluster☆12Nov 12, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Distributed, Versioned, Image-oriented Dataservice☆202Updated this week
- ☆41Jun 29, 2026Updated last week
- ☆10Updated this week
- ☆12Mar 25, 2022Updated 4 years ago
- Flood filling networks for segmenting electron microscopy of neural tissue☆26Dec 26, 2022Updated 3 years ago
- MyST markdown paper template with actions☆14Feb 8, 2023Updated 3 years ago
- BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.☆20Jul 1, 2026Updated last week