Alternatives and similar repositories for fafbseg-py

Users that are interested in fafbseg-py are comparing it to the libraries listed below

• YuelongWu / feabas
  Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data
  ☆20Updated last week
• CAVEconnectome / PyChunkedGraph
  Data backend for fast proofreading of cell segmentations in connectomics datasets
  ☆26Updated 3 weeks ago
• navis-org / navis
  Python library for analysis of neuroanatomical data.
  ☆108Updated 2 weeks ago
• seung-lab / cloud-volume
  Read and write Neuroglancer datasets programmatically.
  ☆168Updated this week
• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆62Updated last week
• CAVEconnectome / nglui
  ☆13Updated last month
• CAVEconnectome / CAVEclient
  This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.
  ☆35Updated last week
• danionella / warpfield
  GPU-based 3D non-rigid volumetric registration
  ☆41Updated 3 months ago
• reimerlab / NEURD
  NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions
  ☆20Updated 7 months ago
• YijieYin / connectome_interpreter
  ☆23Updated this week
• brainglobe / brainglobe-segmentation
  Segmentation of anatomical structures in a common coordinate space
  ☆34Updated last week
• e11bio / volara
  Block-wise operations for large nD volumes
  ☆43Updated last week
• StructuralNeurobiologyLab / SyConn
  Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.
  ☆43Updated 4 months ago
• jasper-tms / the-BANC-fly-connectome
  Information and python tools for the GridTape-TEM dataset of an adult female fly's Brain And Nerve Cord
  ☆15Updated last week
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆32Updated 8 months ago
• AllenInstitute / MicronsBinder
  A collection of notebooks to provide examples of using Microns-explorer.org datasets
  ☆38Updated last year
• CAVEconnectome / MeshParty
  ☆39Updated 3 months ago
• albert597 / TRAILMAP
  ☆45Updated 5 years ago
• brainglobe / brainrender-napari
  A napari plugin to render BrainGlobe atlases and associated data as layers.
  ☆22Updated last week
• google-research / sofima
  Scalable Optical Flow-based Image Montaging and Alignment
  ☆83Updated last week
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 4 years ago
• brainglobe / morphapi
  A Python package to download neuronal morphologies
  ☆17Updated last week
• brainglobe / brainreg-napari
  Automated 3D brain registration in napari with support for multiple species and atlases.
  ☆16Updated last year
• AdaptiveMotorControlLab / CellSeg3D
  A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks
  ☆110Updated 2 months ago
• janclemenslab / napari-video
  Napari plugin for working with video files.
  ☆13Updated 3 months ago
• brainglobe / brainglobe-napari-io
  Read and write files from the BrainGlobe neuroanatomy suite
  ☆15Updated last week
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆89Updated last week
• berenslab / MorphoPy
  A Python package for feature extraction of neural morphologies
  ☆43Updated last month
• brainglobe / brainglobe-heatmap
  Rendering anatomical heatmaps with brainrender and matplotlib
  ☆46Updated last week
• brainglobe / brainreg
  Automated 3D brain registration with support for multiple species and atlases.
  ☆140Updated last week