JaneliaSciComp / SharkViewerLinks
SharkViewer is a web-based viewer for SWC neuron files. It is written entirely in JavaScript using Three.js.
☆24Updated 2 years ago
Alternatives and similar repositories for SharkViewer
Users that are interested in SharkViewer are comparing it to the libraries listed below
Sorting:
- ☆12Updated last week
- ☆45Updated 5 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆49Updated last week
- ☆36Updated 2 months ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆37Updated last year
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆120Updated 2 weeks ago
- Tools for distributed alignment of massive images☆82Updated this week
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆23Updated last week
- Brain flatmaps generation☆11Updated 2 years ago
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆18Updated last month
- Umbrella package to help install/load nat packages☆10Updated 3 years ago
- A python package for the topological analysis of neurons.☆28Updated 4 months ago
- 3D/4D volumetric rendering of microscopy data☆23Updated last month
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆16Updated last week
- TREES toolbox☆28Updated 2 months ago
- ☆18Updated 3 years ago
- Automated 3D brain registration with support for multiple species and atlases.☆135Updated 3 weeks ago
- The ImageJ framework for quantification of neuronal anatomy☆50Updated last week
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆41Updated 11 months ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Segmentation of anatomical structures in a common coordinate space☆33Updated 3 weeks ago
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆13Updated last week
- Software package for neuron reconstruction and visualization☆38Updated last month
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆19Updated 4 years ago
- Python client utilties for interacting with the neuPrint connectome analysis service☆34Updated last week
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 3 months ago
- GPU-based 3D non-rigid volumetric registration☆32Updated 3 weeks ago
- Block-wise task scheduling for large nD volumes.☆30Updated 2 months ago
- The ANTsX Ecosystem for Mapping the Mouse Brain☆13Updated this week
- A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.☆97Updated this week