This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.
☆40Sep 5, 2026Updated 2 weeks ago
Alternatives and similar repositories for CAVEclient
Users that are interested in CAVEclient are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆27Sep 17, 2026Updated last week
- ☆43Sep 1, 2025Updated last year
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆16May 6, 2026Updated 4 months ago
- 3D dense segmentation compression codec based on crack codes.☆18Sep 2, 2026Updated 3 weeks ago
- ☆13Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Aug 25, 2026Updated 3 weeks ago
- Command line tool for registration of very large 3D volumes.☆16Jan 28, 2026Updated 7 months ago
- WebGL-based viewer for volumetric data☆25Sep 12, 2026Updated last week
- Threaded Python and CLI client library for AWS S3, Google Cloud Storage (GCS), in-memory, and the local filesystem.☆45Aug 28, 2026Updated 3 weeks ago
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆26Sep 11, 2026Updated last week
- Read and write Neuroglancer datasets programmatically.☆175Updated this week
- Asynchronous serverless task queue with timed leasing of tasks. Threaded implementations for SQS and local filesystem.☆41Jul 2, 2025Updated last year
- Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight i…☆36Jan 3, 2025Updated last year
- Python SDK for interacting with the BossDB REST API☆23Apr 18, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆46Jul 28, 2025Updated last year
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆65Aug 23, 2026Updated last month
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆69Updated this week
- A unified framework for skeletonization, morphological analysis, and connectivity analysis.☆44Aug 23, 2024Updated 2 years ago
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆29Jul 9, 2026Updated 2 months ago
- View connectomic data stored in neuPrint☆42Updated this week
- ☆37Aug 27, 2026Updated 3 weeks ago
- Performant, pure-Python subgraph isomorphism and monomorphism search (aka "motif search")☆66Aug 16, 2024Updated 2 years ago
- Mesh containment and line segment intersection queries in Python (over rust)☆12Aug 13, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Scalable Optical Flow-based Image Montaging and Alignment☆102Sep 9, 2026Updated 2 weeks ago
- code for storing neurodata images and image annotations☆37Oct 1, 2017Updated 8 years ago
- Your favorite Python graph libraries, scalable and interoperable. Graph databases in memory, and familiar graph APIs for cloud databases.☆117Jul 28, 2026Updated last month
- Machine Learning Methods for Neural Data Analysis☆22May 16, 2025Updated last year
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆216Jul 24, 2026Updated 2 months ago
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆75Aug 25, 2026Updated last month
- Flood filling networks for segmenting electron microscopy of neural tissue☆26Dec 26, 2022Updated 3 years ago
- Shared repo for EM connectomics and Array Tomography render based image processing modules☆18Mar 2, 2026Updated 6 months ago
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆44May 30, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Universal Renderer for Neuroscience☆16Nov 4, 2025Updated 10 months ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21May 11, 2026Updated 4 months ago
- The is a repository containing MATLAB and Python code used in teaching graduate students in neuroscience.☆14Jan 20, 2022Updated 4 years ago
- A short course on network data science at Johns Hopkins University☆22Nov 3, 2023Updated 2 years ago
- Analysis tools specific to the aiephys multipatch project.☆13Oct 23, 2025Updated 11 months ago
- A fast, lightweight 3D viewer for Python based on WGPU☆62Updated this week
- ☆13Updated this week