CAVEconnectome / CAVEclientLinks
This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.
☆31Updated last month
Alternatives and similar repositories for CAVEclient
Users that are interested in CAVEclient are comparing it to the libraries listed below
Sorting:
- ☆12Updated this week
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆12Updated last week
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆18Updated this week
- Block-wise task scheduling for large nD volumes.☆32Updated 5 months ago
- ☆42Updated 3 months ago
- Tools for working with single-neuron morphological reconstructions☆22Updated last year
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆52Updated this week
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆24Updated last week
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆13Updated 2 months ago
- Python library for analysis of neuroanatomical data.☆105Updated 3 weeks ago
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆19Updated 3 months ago
- Read and write Neuroglancer datasets programmatically.☆156Updated last week
- Segmentation of anatomical structures in a common coordinate space☆33Updated 3 weeks ago
- ☆22Updated 5 months ago
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆37Updated last year
- Automated 3D brain registration with support for multiple species and atlases.☆136Updated 3 weeks ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- A python package for the topological analysis of neurons.☆28Updated 6 months ago
- GPU-based 3D non-rigid volumetric registration☆41Updated this week
- Fast, volumetric cell detection. In development.☆18Updated 2 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated 3 weeks ago
- CloudReg☆11Updated last year
- Live Mouse Tracker analysis☆32Updated 2 months ago
- ☆45Updated 5 years ago
- Browser-based NWB visualization and DANDI exploration☆59Updated this week
- WebGL-based viewer for volumetric data☆24Updated this week
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated last week
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated 10 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆14Updated this week