Alternatives and similar repositories for CAVEclient:

Users that are interested in CAVEclient are comparing it to the libraries listed below

• CAVEconnectome / nglui
  ☆10Updated last month
• htem / FANC_auto_recon
  Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset
  ☆12Updated last month
• CAVEconnectome / PyChunkedGraph
  Data backend for fast proofreading of cell segmentations in connectomics datasets
  ☆23Updated this week
• phflot / flow_registration
  Flow-Registration toolbox for 2P motion compensation
  ☆22Updated 7 months ago
• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆47Updated this week
• ankilab / DeepD3
  ☆21Updated 2 weeks ago
• AllenInstitute / neuron_morphology
  Tools for working with single-neuron morphological reconstructions
  ☆21Updated 10 months ago
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆30Updated this week
• YuelongWu / feabas
  Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data
  ☆16Updated this week
• lahammond / BrainJ
  Fiji pipeline for automated serial section reconstruction and mouse brain analysis.
  ☆29Updated last year
• neurodata / CloudReg
  CloudReg
  ☆11Updated 11 months ago
• AllenInstitute / MicronsBinder
  A collection of notebooks to provide examples of using Microns-explorer.org datasets
  ☆34Updated 9 months ago
• yu-lab-vt / AQuA
  An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data
  ☆53Updated 10 months ago
• brainglobe / brainglobe-segmentation
  Segmentation of anatomical structures in a common coordinate space
  ☆30Updated 2 weeks ago
• nel-lab / FIOLA
  ☆34Updated last year
• navis-org / fafbseg-py
  Tools to work with the FlyWire connectome. Fully interoperable with navis.
  ☆13Updated this week
• Leveltlab / SpectralSegmentation
  Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences
  ☆13Updated 3 weeks ago
• PrincetonUniversity / BrainPipe
  ☆18Updated 3 years ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• porteralab / EZcalcium
  Calcium Data Extraction and Analysis
  ☆43Updated 2 years ago
• reimerlab / NEURD
  NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions
  ☆9Updated this week
• fdechaumont / lmt-analysis
  Live Mouse Tracker analysis
  ☆27Updated this week
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆48Updated last year
• NTCColumbia / moco
  motion correction
  ☆17Updated 2 years ago
• StructuralNeurobiologyLab / SyConn
  Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.
  ☆41Updated 8 months ago
• ChristophKirst / ClearMap
  ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.
  ☆53Updated 4 years ago
• bkntr / brainways
  Brainways
  ☆16Updated 2 weeks ago
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆53Updated this week
• seung-lab / neuroglancer
  WebGL-based viewer for volumetric data
  ☆23Updated this week