This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.
☆37Jun 18, 2026Updated 2 weeks ago
Alternatives and similar repositories for CAVEclient
Users that are interested in CAVEclient are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆27Updated this week
- ☆43Sep 1, 2025Updated 10 months ago
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Jun 26, 2026Updated last week
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated 2 months ago
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆15May 6, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆13Jun 17, 2026Updated 2 weeks ago
- Command line tool for registration of very large 3D volumes.☆16Jan 28, 2026Updated 5 months ago
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Apr 18, 2026Updated 2 months ago
- Threaded Python and CLI client library for AWS S3, Google Cloud Storage (GCS), in-memory, and the local filesystem.☆46Jun 29, 2026Updated last week
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆24May 21, 2026Updated last month
- Read and write Neuroglancer datasets programmatically.☆174Jun 4, 2026Updated last month
- Asynchronous serverless task queue with timed leasing of tasks. Threaded implementations for SQS and local filesystem.☆40Jul 2, 2025Updated last year
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆26Jun 17, 2026Updated 2 weeks ago
- Python SDK for interacting with the BossDB REST API☆23Apr 18, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight i…☆36Jan 3, 2025Updated last year
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆45Jul 28, 2025Updated 11 months ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆65Jun 11, 2026Updated 3 weeks ago
- A unified framework for skeletonization, morphological analysis, and connectivity analysis.☆43Aug 23, 2024Updated last year
- View connectomic data stored in neuPrint☆28Jun 8, 2026Updated 3 weeks ago
- Connectome Reconstruction and Exploration Simple Tool☆21Jan 29, 2024Updated 2 years ago
- Performant, pure-Python subgraph isomorphism and monomorphism search (aka "motif search")☆66Aug 16, 2024Updated last year
- Mesh containment and line segment intersection queries in Python (over rust)☆12Nov 19, 2025Updated 7 months ago
- Mesh generation from sparse matrices☆23Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scalable Optical Flow-based Image Montaging and Alignment☆96Updated this week
- A connectome-constrained deep mechanistic network (DMN) model of the fruit fly visual system in PyTorch.☆122Mar 26, 2026Updated 3 months ago
- Flood filling networks for segmenting electron microscopy of neural tissue☆26Dec 26, 2022Updated 3 years ago
- A PyTorch add-on for working with image mappings and displacement fields, including Spatial Transformers☆52Feb 15, 2022Updated 4 years ago
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆54Jun 20, 2025Updated last year
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆211May 20, 2026Updated last month
- A Versatile and Open Source One- and Two-Photon Light-Sheet Microscope Design☆15Jul 27, 2023Updated 2 years ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21May 11, 2026Updated last month
- Shared repo for EM connectomics and Array Tomography render based image processing modules☆17Mar 2, 2026Updated 4 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆42May 30, 2024Updated 2 years ago
- A short course on network data science at Johns Hopkins University☆21Nov 3, 2023Updated 2 years ago
- A powerful framework for decentralized federated learning with user-defined communication topology☆12Dec 14, 2021Updated 4 years ago
- ☆13May 1, 2026Updated 2 months ago
- Analysis tools specific to the aiephys multipatch project.☆12Oct 23, 2025Updated 8 months ago
- Code to the paper "Self-Supervised Graph Representation Learning for Neuronal Morphologies"☆18Apr 5, 2024Updated 2 years ago
- ☆15Mar 26, 2024Updated 2 years ago