This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.
☆45Sep 5, 2026Updated last month
Alternatives and similar repositories for CAVEclient
Users that are interested in CAVEclient are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Jun 26, 2026Updated 4 months ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆27Updated this week
- Information and python tools for the GridTape-TEM dataset of an adult female fly's Brain And Nerve Cord☆26Oct 18, 2026Updated 2 weeks ago
- A contrastive learning framework for 3D electron microscopy data☆13Jan 17, 2023Updated 3 years ago
- Supplemental source code for Nern et al. 2025: "Connectome-driven neural inventory of a complete visual system" (https://doi.org/10.1038/…☆13Jun 17, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated 6 months ago
- 3D dense segmentation compression codec based on crack codes.☆18Updated this week
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆17Oct 18, 2026Updated 2 weeks ago
- Python library for analysis of neuroanatomical data.☆140Updated this week
- Read and write Neuroglancer datasets programmatically.☆176Oct 27, 2026Updated last week
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Updated this week
- MICrONS databook and analysis tutorials☆14Oct 8, 2026Updated 3 weeks ago
- Asynchronous serverless task queue with timed leasing of tasks. Threaded implementations for SQS and local filesystem.☆41Updated this week
- Threaded Python and CLI client library for AWS S3, Google Cloud Storage (GCS), in-memory, and the local filesystem.☆45Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Supplemental data for Berg et al. (2025)☆29Aug 7, 2026Updated 2 months ago
- Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight i…☆37Jan 3, 2025Updated last year
- Python SDK for interacting with the BossDB REST API☆23Apr 18, 2025Updated last year
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆44May 30, 2024Updated 2 years ago
- ☆17Jul 20, 2026Updated 3 months ago
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆29Updated this week
- Generates neuroscience videos from high-level descriptions using Blender or VVDViewer.☆37Updated this week
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆46Oct 9, 2026Updated 3 weeks ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆65Oct 18, 2026Updated 2 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A unified framework for skeletonization, morphological analysis, and connectivity analysis.☆44Aug 23, 2024Updated 2 years ago
- Scripts and code relating to building anatomical templates.☆11Aug 14, 2026Updated 2 months ago
- ☆17Mar 26, 2024Updated 2 years ago
- A set of tools for elastic image registration in Julia☆11Oct 4, 2018Updated 8 years ago
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆54Jun 20, 2025Updated last year
- Image pyramid generation for grayscale and segmentation image resize.☆12Jul 30, 2026Updated 3 months ago
- Connectome-constrained Latent Variable Model of Whole-brain Neural Activity, ICLR 2022☆19Apr 26, 2022Updated 4 years ago
- Performant, pure-Python subgraph isomorphism and monomorphism search (aka "motif search")☆66Aug 16, 2024Updated 2 years ago
- Mesh containment and line segment intersection queries in Python (over rust)☆12Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- SEAMLeSS (under active development)☆11Aug 23, 2021Updated 5 years ago
- Volumetric data viewer in Jupyter notebooks with HoloViz Panel and Neuroglancer☆13Feb 4, 2025Updated last year
- Explore the FlyWire Connectome☆157Sep 8, 2026Updated last month
- Conversion of neuroimaging data for display in Neuroglancer☆31Aug 19, 2026Updated 2 months ago
- Support functions for analysis of Drosophila connectomes especially the FAFB-FlyWire whole brain☆14Updated this week
- general purpose c++ library☆14Jan 18, 2017Updated 9 years ago
- A Python package using Gromov-Wasserstein distance to compare cell shapes☆28Oct 15, 2026Updated 2 weeks ago