gxiaolab / REDITsLinks
RNA editing tests
☆17Updated 5 years ago
Alternatives and similar repositories for REDITs
Users that are interested in REDITs are comparing it to the libraries listed below
Sorting:
- An R package to time somatic mutations☆65Updated 4 years ago
- Tutorial Website☆60Updated 4 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.☆24Updated 3 years ago
- ATAC-seq processing pipeline☆34Updated 3 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆57Updated 2 weeks ago
- A modular, containerized pipeline for ATAC-seq data processing☆61Updated 2 months ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- ☆17Updated 6 years ago
- ☆51Updated last year
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆32Updated 3 weeks ago
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated last month
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 4 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- Detection of differential translated genes using Ribo-seq☆16Updated 4 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆75Updated last month
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- An R package to plot maps of clone distributions in somatic evolution☆17Updated last year
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆81Updated 3 years ago
- Micro DNA identification☆24Updated 4 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 3 years ago
- BRIE: Bayesian Regression for Isoform Estimate in Single Cells☆42Updated last year
- Links to ATAC-seq analysis tools☆72Updated 4 years ago
- ☆38Updated 4 years ago