brwnj / fastq-multxLinks
Demultiplexes a fastq.
☆44Updated 4 years ago
Alternatives and similar repositories for fastq-multx
Users that are interested in fastq-multx are comparing it to the libraries listed below
Sorting:
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- tools to find circRNAs in RNA-seq data☆43Updated 7 years ago
- ☆58Updated 3 years ago
- Tutorial Website☆59Updated 4 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- ☆30Updated 6 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆65Updated 6 years ago
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆81Updated 5 months ago
- RiboPlotR package for Ribo-plot☆15Updated last week
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆72Updated 2 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- SingleCell Nanopore sequencing data analysis☆60Updated 3 weeks ago
- code associated with crane-nature-2015, 10.1038/nature14450☆35Updated 9 years ago
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago
- An R interface to the MEME Suite☆50Updated last week
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆37Updated 4 months ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆27Updated 5 years ago
- Detection of differential translated genes using Ribo-seq☆16Updated 4 years ago
- Pipeline for Somatic Variant Calling with WES and WGS data☆21Updated last year
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆27Updated 4 months ago
- A list of alternative splicing analysis resources☆44Updated 2 months ago
- fork of RSeQC python RNAseq metrics suit of tools☆48Updated 6 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆35Updated 2 years ago
- ATAC-seq processing pipeline☆33Updated 3 years ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆62Updated last year
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆61Updated 8 months ago