Henikoff / Cut-and-RunLinks
☆30Updated 6 years ago
Alternatives and similar repositories for Cut-and-Run
Users that are interested in Cut-and-Run are comparing it to the libraries listed below
Sorting:
- ATAC-seq processing pipeline☆33Updated 3 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- Tutorial Website☆59Updated 4 years ago
- HMMRATAC peak caller for ATAC-seq data☆100Updated 6 months ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆66Updated 5 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆70Updated 4 months ago
- tools to find circRNAs in RNA-seq data☆43Updated 7 years ago
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆26Updated 4 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆58Updated 2 weeks ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- A Perl/R pipeline for plotting metagenes