akikuno / DAJIN2
🔬 Genotyping tool for genome-edited samples, utilizing nanopore sequencer target sequencing
☆11Updated last month
Alternatives and similar repositories for DAJIN2
Users that are interested in DAJIN2 are comparing it to the libraries listed below
Sorting:
- Quantitative analysis of native tRNA populations using direct RNA nanopore sequencing (Lucas*, Pryszcz* et al., Nat Biotech 2023)☆14Updated 8 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆65Updated last month
- GENE-SWitCH project RNA-Seq analysis pipeline☆25Updated 3 months ago
- Repository of common bioinformatics scripts☆39Updated 3 years ago
- ☆31Updated this week
- ☆11Updated last month
- NGSNGS: Next generation simulator for next generation sequencing data☆50Updated 5 months ago
- Official repo for the standalone package of Coding Potential Calculator (CPC) 2.☆24Updated 3 years ago
- ☆19Updated last year
- scripts for sequence and feature conversion, annotation, analysis ...☆27Updated 2 months ago
- Pipeline to identify isoforms from full-length cDNA sequencing data☆25Updated 2 weeks ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆40Updated 3 months ago
- ☆25Updated 2 months ago
- Evolutionary Transcriptomics with R☆43Updated last week
- ☆31Updated 11 months ago
- Genome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed …☆40Updated 2 weeks ago
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆27Updated last year
- A range of different perl scripts for manipulating sequences, conducting alignments, consensus sequences, changing formats☆29Updated last year
- new repo☆28Updated 4 years ago
- perSVade: personalized Structural Variation detection☆39Updated 2 months ago
- tutorial on pggb☆34Updated 4 months ago
- A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.☆16Updated last month
- Transposable Elements MOvement detection using LOng reads☆21Updated last week
- Calculate GC% and GC deviation for circular genomes☆17Updated 4 years ago
- Simple library/pipeline to generate and handle Hi-C data.☆37Updated 5 months ago
- Analysis of transposable elements☆10Updated last month
- ☆28Updated 4 years ago
- Snakemake pipeline to analyze transposable element 'omics data.☆20Updated last week
- Generates an NCBI .tbl file of annotations on a genome.☆66Updated 7 years ago
- ☆25Updated 9 years ago