AIRR Community Data Standards
☆41Jul 10, 2026Updated last week
Alternatives and similar repositories for airr-standards
Users that are interested in airr-standards are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Detecting TCR involved in immune responses from single RepSeq datasets☆28Jun 17, 2019Updated 7 years ago
- An interactive browser for the VDJdb database☆16Updated this week
- Software for Ontogenic aNalysis of Antibody Repertoires☆19Jun 30, 2026Updated 3 weeks ago
- Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads☆16Dec 5, 2023Updated 2 years ago
- pygor3 repository☆10Nov 20, 2025Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- imNet: a Sequence Network Construction Toolkit☆20Jul 7, 2020Updated 6 years ago
- Quantifiable predictive features define epitope-specific T cell receptor repertoires☆13Dec 8, 2022Updated 3 years ago
- Reproducibility Repo for mvTCR paper☆13Apr 2, 2024Updated 2 years ago
- 📝 [Paper/Tutorial] T-cell repertoire annotation and motif discovery☆14Sep 15, 2025Updated 10 months ago
- Worked example showing how to cluster and visualize flow/mass cytometry data using FlowSOM and Rtsne☆17Jan 30, 2017Updated 9 years ago
- Infer selection pressures on features of amino acid CDR3 sequences.☆25Apr 17, 2024Updated 2 years ago
- ☆38Nov 27, 2023Updated 2 years ago
- IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:☆54Jan 7, 2026Updated 6 months ago
- [DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.☆40Jun 8, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12Dec 12, 2018Updated 7 years ago
- IgSimulator is a versatile tool for simulation of immunoglobulin repertoire☆12Nov 25, 2016Updated 9 years ago
- LEGACY: Git commands to keep a Git repository and Bioconductor SVN in sync☆10Oct 17, 2016Updated 9 years ago
- ☆13Sep 21, 2023Updated 2 years ago
- Vidjil -- High-throughput Analysis of V(D)J Immune Repertoire (mirror, please go to http://gitlab.vidjil.org)☆32Jun 29, 2026Updated 3 weeks ago
- Repo for Dynamic Statistical Comparisons project☆13Feb 5, 2024Updated 2 years ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Mar 30, 2026Updated 3 months ago
- ☆25Jan 4, 2024Updated 2 years ago
- Machine learning models for antibody sequences in PyTorch☆41May 25, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Oct 11, 2019Updated 6 years ago
- PLMFit platform for TL on PLMs☆22Aug 13, 2025Updated 11 months ago
- Git-based antigen specificity database storage & management.☆155Jun 11, 2026Updated last month
- 📝 [Tutorial] RepSeq data mining basics in R☆11Mar 13, 2019Updated 7 years ago
- Jupyter notebooks from our weekly (or so) hackathons☆11Dec 3, 2024Updated last year
- A pipeline for complete and accurate recovery of TCR repertoires from high throughput sequencing data.☆23Sep 10, 2023Updated 2 years ago
- Drug-disease proximity based therapeutic effect screening and analysis☆21Sep 8, 2017Updated 8 years ago
- A RepSeq processing swiss-knife☆43Mar 29, 2024Updated 2 years ago
- R wrapper for Multicore t-SNE☆29Dec 29, 2017Updated 8 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Geocoding Australia Using the PSMA Data☆15Mar 3, 2023Updated 3 years ago
- ☆12Sep 20, 2019Updated 6 years ago
- Chrome extension that inserts a custom stylesheet and script into every web page.☆11Jul 16, 2019Updated 7 years ago
- Highly specific clustering of T cell receptor CDR3s☆43Jun 21, 2022Updated 4 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Aug 9, 2022Updated 3 years ago
- ☆31May 24, 2022Updated 4 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆10Jun 23, 2018Updated 8 years ago