Alternatives and similar repositories for airr-standards

Users that are interested in airr-standards are comparing it to the libraries listed below

• seshadrilab / tcrconvert
  Convert TCR gene names
  ☆15Updated 5 months ago
• TomKellyGenetics / graphsim
  R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
  ☆24Updated 4 months ago
• brennanpincardiff / drawProteins
  Creating package to draw proteins from Uniprot API
  ☆35Updated last year
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆21Updated 3 months ago
• steven-shuken / permFDP
  An R package for correcting p-values for multiple hypothesis testing in comparative quantitative omics experiments using permutation-base…
  ☆12Updated 2 years ago
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 3 years ago
• ebiwd / EBI-Icon-fonts
  A collection of functional and scientific icons for EMBL-EBI sites.
  ☆17Updated 5 years ago
• nullranges / nullranges
  Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…
  ☆27Updated 6 months ago
• kuijjerlab / retriever
  Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data
  ☆15Updated 3 years ago
• COMBINE-lab / EDS
  A simple, intuitive and Efficient single cell binary Data Storage format
  ☆15Updated 6 years ago
• fraenkel-lab / OmicsIntegrator
  This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…
  ☆31Updated 6 years ago
• BiocPy / rds2py
  Read RDS files, in Python
  ☆26Updated last week
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆33Updated 2 months ago
• mararie / lionessR
  Single sample network reconstruction in R
  ☆23Updated 5 years ago
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆23Updated last year
• biodatascience / compbio
  Introduction to Computational Biology
  ☆32Updated 10 months ago
• pachterlab / BBB
  Bioinformatics for Benched Biologists
  ☆22Updated 5 years ago
• liulab-dfci / CHIPS
  A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data
  ☆20Updated 4 years ago
• moosa-r / rbioapi
  rbioapi: User-Friendly R Interface to Biologic Web Services' API
  ☆22Updated 3 months ago
• GreiffLab / immuneSIM
  ☆38Updated last year
• pmartR / pmartR
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…
  ☆46Updated 2 months ago
• broadinstitute / protigy
  Proteomics Toolset for Integrative Data Analysis
  ☆25Updated 6 months ago
• andrewGhazi / malacoda
  Bayesian analysis of MPRA and other high-throughput genomic assays
  ☆10Updated 5 years ago
• jpquast / protti
  Picotti lab data analysis package.
  ☆64Updated 5 months ago
• jorainer / ensembldb
  This is the ensembldb development repository.
  ☆35Updated last month
• slowkow / hlabud
  🐶 hlabud: HLA genotype analysis in R
  ☆17Updated 6 months ago
• pathwayforte / pathway-forte
  A Python package for benchmarking pathway database with functional enrichment and classification methods
  ☆13Updated 4 years ago
• SamGG / ropls
  ☆12Updated 7 years ago
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆21Updated last year
• tidyomics / tidy-genomics-talk
  ☆17Updated last year