AIRR Community Data Standards
☆41Aug 11, 2026Updated 2 weeks ago
Alternatives and similar repositories for airr-standards
Users that are interested in airr-standards are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An interactive browser for the VDJdb database☆16Updated this week
- ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data☆23May 21, 2024Updated 2 years ago
- pygor3 repository☆10Nov 20, 2025Updated 9 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆76Updated this week
- imNet: a Sequence Network Construction Toolkit☆20Jul 7, 2020Updated 6 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Quantifiable predictive features define epitope-specific T cell receptor repertoires☆13Dec 8, 2022Updated 3 years ago
- 📝 [Paper/Tutorial] T-cell repertoire annotation and motif discovery☆14Sep 15, 2025Updated 11 months ago
- Worked example showing how to cluster and visualize flow/mass cytometry data using FlowSOM and Rtsne☆17Jan 30, 2017Updated 9 years ago
- B-cell repertoire and clonal family tree explorer☆18Aug 24, 2026Updated last week
- Infer selection pressures on features of amino acid CDR3 sequences.☆25Apr 17, 2024Updated 2 years ago
- ☆38Nov 27, 2023Updated 2 years ago
- IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:☆54Jan 7, 2026Updated 7 months ago
- [DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.☆40Jun 8, 2020Updated 6 years ago
- ☆12Dec 12, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- IgSimulator is a versatile tool for simulation of immunoglobulin repertoire☆12Nov 25, 2016Updated 9 years ago
- LEGACY: Git commands to keep a Git repository and Bioconductor SVN in sync☆10Oct 17, 2016Updated 9 years ago
- ☆13Sep 21, 2023Updated 2 years ago
- Optimized integer division for Java☆20Oct 13, 2020Updated 5 years ago
- Repo for Dynamic Statistical Comparisons project☆13Feb 5, 2024Updated 2 years ago
- Python library for immune repertoire analysis☆17Aug 6, 2026Updated 3 weeks ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆45Mar 30, 2026Updated 5 months ago
- ☆25Jan 4, 2024Updated 2 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Oct 11, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Utilities for large scale distributed single cell data processing☆24Jan 20, 2026Updated 7 months ago
- Git-based antigen specificity database storage & management.☆155Updated this week
- 📝 [Tutorial] RepSeq data mining basics in R☆11Mar 13, 2019Updated 7 years ago
- A pipeline for complete and accurate recovery of TCR repertoires from high throughput sequencing data.☆23Sep 10, 2023Updated 2 years ago
- An UMI-tagged sequencing swiss-knife. Built for amplicon sequencing of immune repertoires, ctDNA and rare mutations, single-cell sequenci…☆43Aug 18, 2026Updated last week
- R wrapper for Multicore t-SNE☆29Dec 29, 2017Updated 8 years ago
- Geocoding Australia Using the PSMA Data☆15Mar 3, 2023Updated 3 years ago
- ☆12Sep 20, 2019Updated 6 years ago
- ☆15Jan 16, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Highly specific clustering of T cell receptor CDR3s☆43Jun 21, 2022Updated 4 years ago
- Extração, tratamento e caregamento de dados públicos direta ou indiretamente relacionados ao Sistema Único de Saúde brasileiro, tendo com…☆13Aug 23, 2024Updated 2 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Aug 9, 2022Updated 4 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆10Jun 23, 2018Updated 8 years ago
- A proviral intactness pipeline.☆10May 31, 2023Updated 3 years ago
- A simple and high-performance Java B-tree: drop-in replacement for java.util.TreeMap☆31Nov 3, 2019Updated 6 years ago
- Software tools for the analysis of epitope-specific T cell receptor (TCR) repertoires (scroll down for the README)☆87Oct 6, 2021Updated 4 years ago