mPloenzke / learnMotifsLinks
☆12Updated 6 years ago
Alternatives and similar repositories for learnMotifs
Users that are interested in learnMotifs are comparing it to the libraries listed below
Sorting:
- Fast Inference of Networks from Directed Regulations☆22Updated last year
- Variant impact phenotyping using Perturb-seq☆9Updated last year
- Repository for the code for DeepATAC project presented at WCB workshop in ICML2017☆22Updated 7 years ago
- Scripts for building computational models of gene regulation with tensorflow☆27Updated 2 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- Probabilistic pseudotime for single-cell RNA-seq data☆10Updated 7 years ago
- Documentation and tutorials worth sharing.☆10Updated 2 years ago
- Code for the MSB publication: Exploring amino acid functions and positional subtypes in a deep mutational landscape☆11Updated 3 years ago
- Single cell network synthesis toolkit☆23Updated 4 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆42Updated 3 weeks ago
- ☆20Updated 4 years ago
- An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data☆52Updated 7 years ago
- ☆16Updated 2 years ago
- Single-cell Hierarchical Poisson Factorization☆70Updated 2 years ago
- PAthway Representation and Analysis by Direct Inference on Graphical Models☆44Updated 7 years ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆56Updated 2 years ago
- AC-PCA: simultaneously performs dimension reduction and adjustment for confounding variation☆14Updated 4 years ago
- Dynamical systems methods for RNA velocity analysis☆24Updated 4 years ago
- Descriptive probabilistic marker gene approach to single-cell pseudotime inference☆29Updated 5 years ago
- ☆12Updated last year
- An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data☆7Updated 7 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆60Updated 4 years ago
- GrandPrix☆16Updated 6 years ago
- Summary statistics for repertoires☆17Updated 2 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- Analysis steps to calculate RNA Velocity in Bulk RNA-Seq samples. Step by Step Guide.☆16Updated 5 years ago
- Methods for inferring undirected networks from data☆45Updated 4 years ago
- ☆20Updated 10 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago