adamshch / SEUDOLinks
☆8Updated 3 years ago
Alternatives and similar repositories for SEUDO
Users that are interested in SEUDO are comparing it to the libraries listed below
Sorting:
- ☆34Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- motion correction☆17Updated 2 years ago
- Calcium imaging inter-session alignment☆11Updated 2 weeks ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated 3 weeks ago
- Calcium Data Extraction and Analysis☆44Updated 2 years ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆31Updated 5 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆50Updated last year
- miniscope analysis pipeline with interactive visualizations☆94Updated 11 months ago
- Activity Quantification and Analysis for molecular spatiotemporal signals☆25Updated 3 months ago
- HNCcorr algorithm for neuron identification in calcium imaging datasets.☆12Updated 2 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated last year
- ☆52Updated 10 months ago
- Tools for working with single-neuron morphological reconstructions☆22Updated last year
- Region Of Interest Classification and Tracking☆19Updated last week
- IaC codebase for the NeuroCAAS Platform☆37Updated last year
- Analysis package for miniscope data☆14Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆147Updated last month
- Match suite2p ROIs between imaging sessions☆26Updated 6 years ago
- https://nutil.readthedocs.io/en/latest/☆13Updated 2 weeks ago
- Repo for CCN workshop on caiman and mesmerize in January 2023☆13Updated 2 years ago
- Stream data from PrairieView into MATLAB to allow online processing and analysis☆11Updated last year
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆15Updated this week
- Rendering anatomical heatmaps with brainrender and matplotlib☆43Updated last week
- Brainways☆18Updated last month
- Fast, volumetric cell detection. In development.☆18Updated last month
- Revealing neural correlates of behavior without behavioral measurements☆14Updated 5 years ago
- ☆39Updated 3 years ago