cunningham-lab / neurocaasLinks
IaC codebase for the NeuroCAAS Platform
☆37Updated last year
Alternatives and similar repositories for neurocaas
Users that are interested in neurocaas are comparing it to the libraries listed below
Sorting:
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆61Updated this week
- Browser-based NWB visualization and DANDI exploration☆59Updated 2 weeks ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆101Updated this week
- Region Of Interest Classification and Tracking☆19Updated last week
- NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files☆25Updated last month
- ☆28Updated last year
- IBL core shared libraries☆63Updated 2 weeks ago
- Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.☆50Updated 4 months ago
- Deconvolution of calcium imaging data☆96Updated 5 months ago
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆15Updated this week
- Tools, algorithms, and frameworks for managing and analyzing neural data.☆20Updated 3 years ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆100Updated this week
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆69Updated this week
- ☆22Updated 8 months ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆40Updated 3 months ago
- YASS: Yet Another Spike Sorter☆68Updated 2 years ago
- Shareable, interactive scientific figures in the cloud☆36Updated 7 months ago
- ☆52Updated 10 months ago
- Web app for viewing results of ephys spike sorting☆26Updated 4 months ago
- Data format specification schema for the NWB neurophysiology data format☆58Updated last week
- Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…☆18Updated 3 years ago
- miniscope analysis pipeline with interactive visualizations☆94Updated 11 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆147Updated last month
- ☆8Updated 3 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Adaptive Platform for Neuroscience Experiments☆40Updated last month
- Algorithm for automated source extraction from 1P data☆20Updated 2 years ago
- Revealing neural correlates of behavior without behavioral measurements☆14Updated 5 years ago
- Interactive Python course for using the Neurodata Without Borders format☆15Updated 6 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago