Whitlock-Group / HERBSLinks
☆52Updated last year
Alternatives and similar repositories for HERBS
Users that are interested in HERBS are comparing it to the libraries listed below
Sorting:
- Histology processing☆72Updated last month
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆41Updated last month
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated last month
- Registration of cells across sessions.☆76Updated last year
- Tools to work with Allen Inst CCF data in matlab☆145Updated 6 months ago
- Calcium imaging inter-session alignment☆16Updated last month
- Python package to handle probe layout, geometry and wiring to device.☆78Updated last week
- pyqt5 dependent applications for IBL sessions☆32Updated 2 weeks ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated 3 weeks ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- A curated list of awesome Neuropixels resources.☆124Updated last month
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated 3 weeks ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 3 weeks ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated last week
- Collection of probe description for probeinterface☆17Updated last week
- A gui for browsing joint calcium imaging + behavioral data.☆55Updated last year
- ☆27Updated last week
- Match suite2p ROIs between imaging sessions☆28Updated 6 years ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆185Updated 2 weeks ago
- Fiber Photometry Modular Analysis Tool Suite☆42Updated 4 years ago
- ☆18Updated 2 years ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 4 months ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆30Updated 2 months ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated this week
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆13Updated 2 years ago
- Browser-based NWB visualization and DANDI exploration☆62Updated last week
- "Approaches to Study Neural Circuits" course☆65Updated last year