brainglobe / brainglobe-napari-ioLinks
Read and write files from the BrainGlobe neuroanatomy suite
☆15Updated last week
Alternatives and similar repositories for brainglobe-napari-io
Users that are interested in brainglobe-napari-io are comparing it to the libraries listed below
Sorting:
- Visualise brainreg registration output☆10Updated 4 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆24Updated last week
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- Efficient cell detection in large images using cellfinder in napari☆22Updated last year
- Segmentation of anatomical structures in a common coordinate space☆34Updated last week
- Brainways☆22Updated 3 months ago
- Anatomical space conventions made easy.☆12Updated last week
- Loading and saving of image data.☆10Updated last year
- ☆10Updated 2 years ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated last week
- brainglobe.info website☆11Updated last week
- Build unbiased anatomical templates from individual images☆12Updated this week
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 9 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated last week
- How to use Aligning Big Brains and Atlases with Python☆14Updated 2 years ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 5 years ago
- Re-usable GitHub Action scripts☆13Updated this week
- Standalone cellfinder cell detection algorithm☆20Updated last year
- ☆11Updated last month
- A package to manage electrophysiology analysis.☆22Updated last week
- Utility to create a basic Python project structure with tests, CI etc.☆34Updated last week
- NIU website on common software problems and their troubleshooting☆10Updated 2 weeks ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated 2 years ago
- UNRAVEL: UN-biased high-Resolution Analysis and Validation of Ensembles using Light sheet images☆13Updated this week
- ☆18Updated 3 years ago
- Mix-and-match computer vision tools for your animal behaviour analysis☆21Updated this week
- Fancier logging with python.☆14Updated last week
- A repository for our participation in Google Summer of Code☆13Updated 7 months ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated last week