brainglobe / brainglobe-napari-ioLinks
Read and write files from the BrainGlobe neuroanatomy suite
☆14Updated 3 weeks ago
Alternatives and similar repositories for brainglobe-napari-io
Users that are interested in brainglobe-napari-io are comparing it to the libraries listed below
Sorting:
- Visualise brainreg registration output☆10Updated 3 years ago
- Segmentation of anatomical structures in a common coordinate space☆33Updated 2 weeks ago
- Efficient cell detection in large images using cellfinder in napari☆22Updated last year
- Registration to BrainGlobe atlases in napari using Elastix☆23Updated 3 weeks ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- Brainways☆21Updated 2 months ago
- Loading and saving of image data.☆10Updated last year
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated 3 weeks ago
- Anatomical space conventions made easy.☆10Updated 3 weeks ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated 3 weeks ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- ☆10Updated 2 years ago
- Build unbiased anatomical templates from individual images☆12Updated last week
- How to use Aligning Big Brains and Atlases with Python☆14Updated 2 years ago
- Re-usable GitHub Action scripts☆12Updated 3 weeks ago
- Mix-and-match computer vision tools for your animal behaviour analysis☆20Updated last week
- Standalone cellfinder cell detection algorithm☆20Updated last year
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 8 months ago
- Fancier logging with python.☆14Updated 3 weeks ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated last year
- Utility to create a basic Python project structure with tests, CI etc.☆33Updated 3 weeks ago
- NIU website on common software problems and their troubleshooting☆10Updated 3 weeks ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- ☆18Updated 3 years ago
- ☆18Updated 3 years ago
- ☆45Updated 5 years ago
- ☆11Updated last week
- A package to manage electrophysiology analysis.☆23Updated last week
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated last month
- Fast, volumetric cell detection. In development.☆20Updated 4 months ago