ZhaiLab-SUSTech / FLEPSeqLinks
The analysis pipeline for FLEP-seq
☆16Updated 2 years ago
Alternatives and similar repositories for FLEPSeq
Users that are interested in FLEPSeq are comparing it to the libraries listed below
Sorting:
- ☆11Updated 5 years ago
- Nanopore 3' end-capture sequencing (Begik et al., bioRxiv 2021)☆14Updated 6 months ago
- Long read to rMATS☆32Updated 2 years ago
- ☆38Updated 2 years ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆15Updated last year
- isoCirc☆10Updated 2 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 9 months ago
- A legacy repository. Was replaced by distiller, cooler, and cooltools.☆21Updated 5 years ago
- single-nucleus nanopore reads processing pipeline☆16Updated 2 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Updated 6 years ago
- ☆20Updated this week
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- Circular RNA Identification for Nanopore Sequencing☆22Updated last year
- R package to detect splicing QTLs (sQTLs)☆13Updated 2 years ago
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated 2 years ago
- DiffDomain is a statistically sound method for detecting differential TADs between conditions☆17Updated 6 months ago
- ☆64Updated 3 months ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- ☆27Updated 3 years ago
- General Use Scripts and Helper functions☆16Updated 7 years ago
- bioinformatic pipeline for GLORI☆22Updated last year
- 4C-seq processing pipeline☆26Updated 9 months ago
- SingleCell Nanopore sequencing data analysis☆63Updated 7 months ago
- Updated and optimized fork of BSMAP☆23Updated 5 years ago
- Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.☆52Updated 6 months ago
- ☆12Updated 6 years ago
- ☆22Updated 2 years ago
- ☆20Updated 3 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- an efficient Hi-C data processing pipeline☆17Updated last year