mgalardini / pdb2uniprotLinks
Convert PDB residues to their Uniprot equivalents
☆17Updated 5 years ago
Alternatives and similar repositories for pdb2uniprot
Users that are interested in pdb2uniprot are comparing it to the libraries listed below
Sorting:
- Python package and command line tool for epitope prediction☆52Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆72Updated 2 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆42Updated last month
- Evolutionary conservation estimation of residues or nucleotides☆47Updated 3 years ago
- Mutation effects predicted from sequence co-variation☆69Updated 8 years ago
- a collection of colabs useful for molecular biology☆31Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆59Updated 2 months ago
- Evolutionary velocity with protein language models☆94Updated last year
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- ☆30Updated 4 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆59Updated 5 months ago
- ☆25Updated last year
- Predict the structure of immune receptor proteins☆53Updated 10 months ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆26Updated 2 years ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆90Updated last year
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆41Updated last year
- A platform to do RNA science☆27Updated 4 years ago
- A Python platform for Structural Bioinformatics☆57Updated 6 months ago
- ☆39Updated 4 years ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆61Updated 6 months ago
- ☆41Updated last week
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆17Updated 6 years ago
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- Python package for investigating the structural context of PTMs☆28Updated 8 months ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆34Updated 2 years ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆40Updated last year
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆27Updated 7 months ago
- ☆37Updated 2 months ago