single cell and bulk RNASeq analysis scripts
☆14Jan 13, 2022Updated 4 years ago
Alternatives and similar repositories for scRNASeq-bulkRNASeq
Users that are interested in scRNASeq-bulkRNASeq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Codes for our paper "Single-Cell RNA-Seq Reveals Dynamic Early Embryonic-like Programs during Chemical Reprogramming" published by Cell S…☆11Sep 5, 2020Updated 5 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- bioinformatics R test code☆14Mar 29, 2026Updated 2 weeks ago
- Data visualization with R☆12Dec 12, 2020Updated 5 years ago
- ☆11Mar 14, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆18Oct 4, 2023Updated 2 years ago
- Accurate haplotype construction and detection of selection signatures enabled by 889 high quality pig genome sequences☆13May 11, 2023Updated 2 years ago
- I often use some of the self-written programs.☆16Nov 13, 2025Updated 5 months ago
- A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis☆21Feb 14, 2024Updated 2 years ago
- WGS Sequencing In Hadoop MapReduce☆15Oct 13, 2020Updated 5 years ago
- ☆17Nov 26, 2023Updated 2 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- Visualize cancer genomes with FAIR single-cell RNA-seq data☆13Jan 5, 2023Updated 3 years ago
- ☆16May 10, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- ☆10Feb 25, 2024Updated 2 years ago
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆14Jan 9, 2026Updated 3 months ago
- ☆18Apr 18, 2024Updated last year
- ☆21Nov 15, 2024Updated last year
- A cheat sheet for Bioinformatians.☆11Aug 9, 2017Updated 8 years ago
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆16Feb 9, 2026Updated 2 months ago
- single cell sequencing analysis tutorial☆18Jan 15, 2020Updated 6 years ago
- XEnograft Visualization & Analysis☆11Oct 18, 2025Updated 5 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- 整合型的对于生物学注释的信息/GO和KEGG全谱注释和富集☆14Nov 8, 2017Updated 8 years ago
- Repository☆10Oct 23, 2024Updated last year
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆50Jun 30, 2023Updated 2 years ago
- ☆16Sep 21, 2021Updated 4 years ago
- A python package for the identification of lncRNA from the assembled novel transcripts☆17Oct 28, 2021Updated 4 years ago
- An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests☆14May 27, 2025Updated 10 months ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- ☆12Dec 15, 2020Updated 5 years ago
- Statistical and computational analysis of the human genome☆15Sep 22, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files, rename fasta files (prefix a…☆23Oct 21, 2025Updated 5 months ago
- Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial present…☆19May 16, 2025Updated 10 months ago
- An ATAC-seq pipeline wrapped in NextFlow that can be run by Jupyter☆14Jan 18, 2019Updated 7 years ago
- An introductory course to eQTL analysis.☆10Jul 11, 2025Updated 9 months ago
- Superseded by https://github.com/MD-Anderson-Bioinformatics/BatchEffectsPackage☆12Aug 13, 2020Updated 5 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Feb 26, 2026Updated last month
- A set of processes/pipelines for bioinformatics☆14Updated this week