tariks / peakachuLinks
Genome-wide contact analysis using sklearn
☆68Updated last year
Alternatives and similar repositories for peakachu
Users that are interested in peakachu are comparing it to the libraries listed below
Sorting:
- A computation framework for genome-wide detection of enhancer-hijacking events from chromatin interaction data in re-arranged genomes☆65Updated last year
- A fast and efficient tool for converting chromatin interaction data between genome assemblies☆73Updated 2 years ago
- dcHiC: Differential compartment analysis for Hi-C datasets☆69Updated last year
- HiCorr: a Hi-C data bias-correction pipeline☆28Updated 2 months ago
- A deep-learning framework for predicting a full range of structural variations from bulk and single-cell contact maps☆59Updated last year
- Lightweight converter between hic and cool contact matrices.☆73Updated 11 months ago
- Tools to analyze Dip-C (or other 3C/Hi-C) data