Alternatives and similar repositories for MetMSLine

Users that are interested in MetMSLine are comparing it to the libraries listed below

• dgrapov / CTSgetR
  R interface to Chemical Translation Service (CTS)
  ☆17Updated last year
• ipb-halle / MetFragR
  R package for MetFrag
  ☆23Updated 8 years ago
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆34Updated 4 years ago
• rformassspectrometry / MsCoreUtils
  Core Utils for Mass Spectrometry Data
  ☆17Updated 7 months ago
• wilsontom / msconverteR
  Create .mzML files through the R Console
  ☆11Updated 2 months ago
• kwanjeeraw / grinn
  a Graph database and R package for omic data integration
  ☆20Updated 9 years ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆30Updated last year
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆22Updated 4 years ago
• WandeRum / MVI-evaluation
  Missing value imputation and evaluation, especially for metabolomics data sets
  ☆19Updated 7 years ago
• Nextflow4Metabolomics / nextflow4ms-dial
  Nextflow-powered MS-DIAL
  ☆10Updated 10 months ago
• unistbig / netGO
  R/Shiny package for network-integrated pathway enrichment analysis
  ☆13Updated 4 years ago
• b2slab / FELLA
  FELLA: an R package for Metabolomics data enrichment through diffusion
  ☆21Updated 4 years ago
• rwehrens / BatchCorrMetabolomics
  Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …
  ☆15Updated 7 years ago
• SimonSchlumbohm / HarmonizR
  ☆16Updated 3 years ago
• sneumann / mzR
  This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…
  ☆46Updated 2 months ago
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆16Updated 8 years ago
• Viant-Metabolomics / Galaxy-M
  Metabolomics Tools for Galaxy
  ☆21Updated 8 years ago
• yafeng / DEqMS
  DEqMS is a tool for quantitative proteomic analysis
  ☆24Updated 7 months ago
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆25Updated last month
• pmartR / pmartR
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…
  ☆47Updated 3 weeks ago
• abbvie-external / OmicNavigator
  Open-Source Software for Omic Data Analysis and Visualization
  ☆40Updated this week
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆23Updated 5 months ago
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆13Updated 2 weeks ago
• KujawinskiLaboratory / Autotuner
  This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…
  ☆16Updated 4 years ago
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆22Updated 4 years ago
• ncats / RaMP-DB
  ☆37Updated 2 months ago
• yan-cri / DEApp
  DEAPP shiny App
  ☆30Updated 3 years ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆43Updated last year
• cpanse / protViz
  Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
  ☆11Updated 5 months ago
• kwanjeeraw / metabox
  a toolbox for metabolomic data analysis, visualization and ‘omic’ integration
  ☆13Updated 7 years ago