Bioconductor / SummarizedExperimentLinks
A container (S4 class) for matrix-like assays
☆36Updated 3 weeks ago
Alternatives and similar repositories for SummarizedExperiment
Users that are interested in SummarizedExperiment are comparing it to the libraries listed below
Sorting:
- Representation and manipulation of genomic intervals☆46Updated 2 weeks ago
- Project Website:☆54Updated 3 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 5 years ago
- Brings SummarizedExperiment to the tidyverse☆26Updated this week
- Bioconductor package for management of multi-assay data☆72Updated last month
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆25Updated this week
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 10 months ago
- Explore design matrices interactively with R/Shiny☆37Updated last week
- The blog of tidyomics☆14Updated 2 months ago
- Glimma R package☆50Updated last year
- Clone of the Bioconductor repository for the basilisk package.☆28Updated last month
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆79Updated this week
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- R interface to genome annotation files and the UCSC genome browser☆35Updated last week
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- Foundation of integer range manipulation in Bioconductor☆22Updated this week
- A tidy interface for coverage analysis☆30Updated 5 years ago
- Save and load your R sessions faster using parallel compression☆26Updated 6 years ago
- Bioconductor facilities for parallel evaluation☆68Updated 3 weeks ago
- An R package to plot interactive three-way differential expression analysis☆38Updated 2 years ago
- R package wrapping bedtools☆44Updated 6 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- R package for plotting 3D graphical visualization of multi-omics data.☆23Updated 3 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆67Updated last month
- Efficient manipulation of biological strings☆65Updated 3 months ago
- A General Framework for Consensus Partitioning☆63Updated 8 months ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 4 months ago