Brings bulk and pseudobulk transcriptomics to the tidyverse
☆181Sep 2, 2026Updated this week
Alternatives and similar repositories for tidybulk
Users that are interested in tidybulk are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Seurat meets tidyverse. The best of both worlds.☆166Mar 3, 2026Updated 6 months ago
- Draw heatmap simply using a tidy data frame☆364Feb 7, 2026Updated 6 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Sep 23, 2020Updated 5 years ago
- ☆10Oct 6, 2020Updated 5 years ago
- Brings SummarizedExperiment to the tidyverse☆31Aug 21, 2026Updated 2 weeks ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Brings SingleCellExperiment objects to the tidyverse☆36Jul 20, 2026Updated last month
- A tidyverse suite for (pre-) machine-learning: cluster, PCA, permute, impute, rotate, redundancy, triangular, smart-subset, abundant and …☆32Jul 25, 2023Updated 3 years ago
- The blog of tidyomics☆13Jul 12, 2025Updated last year
- Label elements within user drawn gates☆26Oct 10, 2025Updated 10 months ago
- (Ready) Yet Another bioinformatics workflow engine https://traitome.github.io/oxo-flow/latest/☆17Updated this week
- pathfindR: Enrichment Analysis Utilizing Active Subnetworks☆203Jul 2, 2026Updated 2 months ago
- piano - An R/Bioconductor package for gene set analysis☆14Sep 13, 2022Updated 3 years ago
- R package to infer biological activities from omics data using a collection of methods.☆304Dec 16, 2025Updated 8 months ago
- R/shiny interface for interactive visualization of data in SummarizedExperiment objects☆230Jul 13, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- TRAjectory-based Differential Expression analysis for SEQuencing data☆310Jun 17, 2025Updated last year
- Visualization of Functional Enrichment Result☆259Jun 26, 2026Updated 2 months ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆83Jul 17, 2026Updated last month
- Multi-Omics Factor Analysis☆421Aug 26, 2026Updated last week
- Color blindness friendly visualization of single-cell and bulk RNA-sequencing data☆215Dec 10, 2025Updated 8 months ago
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆106Jan 12, 2026Updated 7 months ago
- Combination matrix axis for 'ggplot2' to create 'UpSet' plots☆399Jan 23, 2026Updated 7 months ago
- Fast Gene Set Enrichment Analysis☆457Jun 27, 2026Updated 2 months ago
- ☆369Jul 18, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A toolkit for single-cell immune profiling☆374Aug 14, 2026Updated 3 weeks ago
- Easily add significance brackets to your ggplots☆614Mar 29, 2026Updated 5 months ago
- ggplot2 extension allowing for plotting various geometries as side panels using the ggplot2 API☆356May 13, 2026Updated 3 months ago
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆245Mar 2, 2026Updated 6 months ago
- Fast genomics quality control tools for sequencing data, written in Rust.☆122Updated this week
- tidy processing of biological sequences in R☆44Jan 8, 2025Updated last year
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 3 years ago
- A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution method…☆549Aug 3, 2026Updated last month
- Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis☆12Mar 10, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Pipeline for generating RNAseq-based cancer patient reports☆15Aug 24, 2026Updated last week
- An R Package for Geneset Enrichment Workflows☆79Aug 21, 2026Updated 2 weeks ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆20May 24, 2021Updated 5 years ago
- An R package for analyzing high-dimensional cytometry data using the tidyverse.☆20Aug 25, 2024Updated 2 years ago
- Easy single cell analysis platform for enrichment☆231Aug 9, 2026Updated 3 weeks ago
- Venn Diagram by ggplot2, with really easy-to-use API.☆182Oct 13, 2025Updated 10 months ago
- BioC2020: Where Software and Biology Connect☆12Mar 15, 2023Updated 3 years ago