Brings bulk and pseudobulk transcriptomics to the tidyverse
☆180Jun 4, 2026Updated last month
Alternatives and similar repositories for tidybulk
Users that are interested in tidybulk are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Seurat meets tidyverse. The best of both worlds.☆166Mar 3, 2026Updated 4 months ago
- Draw heatmap simply using a tidy data frame☆360Feb 7, 2026Updated 4 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Sep 23, 2020Updated 5 years ago
- ☆10Oct 6, 2020Updated 5 years ago
- Brings SummarizedExperiment to the tidyverse☆30Mar 17, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Brings SingleCellExperiment objects to the tidyverse☆37Nov 10, 2025Updated 7 months ago
- A tidyverse suite for (pre-) machine-learning: cluster, PCA, permute, impute, rotate, redundancy, triangular, smart-subset, abundant and …☆32Jul 25, 2023Updated 2 years ago
- The blog of tidyomics☆13Jul 12, 2025Updated 11 months ago
- Label elements within user drawn gates☆25Oct 10, 2025Updated 8 months ago
- piano - An R/Bioconductor package for gene set analysis☆14Sep 13, 2022Updated 3 years ago
- pathfindR: Enrichment Analysis Utilizing Active Subnetworks☆202Jun 26, 2026Updated last week
- R package to infer biological activities from omics data using a collection of methods.☆300Dec 16, 2025Updated 6 months ago
- TRAjectory-based Differential Expression analysis for SEQuencing data☆302Jun 17, 2025Updated last year
- R/shiny interface for interactive visualization of data in SummarizedExperiment objects☆230Jun 21, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Visualization of Functional Enrichment Result☆258Jun 26, 2026Updated last week
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆83Jan 22, 2026Updated 5 months ago
- Multi-Omics Factor Analysis☆408Jun 15, 2026Updated 2 weeks ago
- Combination matrix axis for 'ggplot2' to create 'UpSet' plots☆397Jan 23, 2026Updated 5 months ago
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆104Jan 12, 2026Updated 5 months ago
- Color blindness friendly visualization of single-cell and bulk RNA-sequencing data☆215Dec 10, 2025Updated 6 months ago
- Fast Gene Set Enrichment Analysis☆448Jun 27, 2026Updated last week
- Easily add significance brackets to your ggplots☆614Mar 29, 2026Updated 3 months ago
- A toolkit for single-cell immune profiling☆371Jun 27, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ggplot2 extension allowing for plotting various geometries as side panels using the ggplot2 API☆357May 13, 2026Updated last month
- ☆364Jun 12, 2026Updated 3 weeks ago
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆226Mar 2, 2026Updated 4 months ago
- tidy processing of biological sequences in R☆44Jan 8, 2025Updated last year
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 3 years ago
- Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis☆12Mar 10, 2021Updated 5 years ago
- A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution method…☆544Jun 1, 2026Updated last month
- Pipeline for generating RNAseq-based cancer patient reports☆14Updated this week
- An R Package for Geneset Enrichment Workflows☆79Jun 26, 2026Updated last week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Easy single cell analysis platform for enrichment☆227Apr 3, 2026Updated 3 months ago
- An R package for analyzing high-dimensional cytometry data using the tidyverse.☆20Aug 25, 2024Updated last year
- Venn Diagram by ggplot2, with really easy-to-use API.☆182Oct 13, 2025Updated 8 months ago
- Interactively analyze single cell genomic data☆188Jan 14, 2026Updated 5 months ago
- BioC2020: Where Software and Biology Connect☆12Mar 15, 2023Updated 3 years ago
- A library for creating complex UpSet plots with ggplot2 geoms☆569Sep 23, 2025Updated 9 months ago
- Explore the cancer relevance of your gene list☆54May 31, 2026Updated last month