Alternatives and similar repositories for GBKviz:

Users that are interested in GBKviz are comparing it to the libraries listed below

• ZhaoXM-Lab / metaMIC
  Assessing and Improving the quality of metagenomic assemblies
  ☆28Updated 3 years ago
• sanger-pathogens / seroba
  k-mer based Pipeline to identify the Serotype from Illumina NGS reads
  ☆21Updated last year
• gamcil / clustermap.js
  ☆31Updated 3 years ago
• jonas-fuchs / varVAMP
  Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.
  ☆36Updated last month
• ku-cbd / PhageBoost
  Rapid discovery of novel prophages using biological feature engineering and machine learning
  ☆37Updated 3 months ago
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆29Updated this week
• mgtools / MinPath
  MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achiev…
  ☆20Updated 3 years ago
• cjneely10 / MetaSanity
  Pipeline for major biological analyses.
  ☆34Updated 3 years ago
• rrwick / Compare-annotations
  A script for comparing old vs new versions of genome annotations
  ☆20Updated last year
• drboothtj / getphylo
  a python package for automated generation of phylogenetic trees from genbank files
  ☆21Updated 3 weeks ago
• BioSina / Panakeia
  Prokaryotic Pangenome Analysis
  ☆24Updated 3 years ago
• compgenomicslab / TreeProfiler
  tree visualization for tree + annotation data
  ☆31Updated this week
• Arcadia-Science / noveltree
  NovelTree is a highly parallelized and computationally efficient phylogenomic workflow that infers gene families, gene family trees, spec…
  ☆20Updated 6 months ago
• peterk87 / nf-flu
  Influenza genome analysis Nextflow workflow
  ☆26Updated last week
• treangenlab / Olivar
  Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens
  ☆24Updated this week
• leylabmpi / Struo2
  Scalable creating/updating of metagenome profiling databases
  ☆60Updated 2 years ago
• wclose / viralMetagenomicsPipeline
  Pipeline for metagenomic community analysis using DNA isolated from virus-like particles
  ☆12Updated 5 years ago
• althonos / pyrodigal-gv
  A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.
  ☆17Updated 7 months ago
• NickJD / ORForise
  Comparison pipeline for Prokaryote Protein Coding Gene Predictors
  ☆23Updated 11 months ago
• salzberg-lab / Balrog
  Bacterial Annotation by Learned Representation of Genes
  ☆55Updated 4 years ago
• Arkadiy-Garber / SprayNPray
  Rapid and simple taxonomic profiling of genome and metagenome contigs
  ☆27Updated last year
• moshi4 / MGCplotter
  Microbial Genome Circular plotting tool for comparative genomics using Circos
  ☆38Updated 2 years ago
• ProwlerForNanopore / ProwlerTrimmer
  Trimming tool for Oxford Nanopore sequence data
  ☆21Updated 3 years ago
• Xiangyang1984 / Gcluster
  A simple-to-use tool for visualizing and comparing genome contexts for numerous genomes
  ☆16Updated 9 months ago
• OLC-Bioinformatics / ConFindr
  Intra-species bacterial contamination detection
  ☆25Updated last month
• JLSteenwyk / orthofisher
  a broadly applicable tool for automated gene identification and retrieval
  ☆30Updated 3 months ago
• dengzac / contig-extender
  ☆22Updated last year
• uio-cels / NucDiff
  In-depth characterization and annotation of differences between two sets of DNA sequences
  ☆60Updated 4 years ago
• rrwick / Small-plasmid-Nanopore
  ☆11Updated 3 years ago
• althonos / pyfastani
  Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.
  ☆22Updated 3 weeks ago