Alternatives and similar repositories for Racmacs:

Users that are interested in Racmacs are comparing it to the libraries listed below

• UBod / msa
  R package for multiple sequence alignment
  ☆17Updated 5 months ago
• mikeblazanin / gcplyr
  gcplyr is an R package that facilitates wrangling and analysis of microbial growth curve data
  ☆30Updated 2 weeks ago
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆22Updated 2 years ago
• tamminenlab / blaster
  BLAST-like algorithm for R based on the nsearch library (https://github.com/stevschmid/nsearch)
  ☆14Updated 10 months ago
• sprouffske / growthcurver
  Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whos…
  ☆44Updated 3 years ago
• reconhub / outbreaker2
  Disease outbreak reconstruction from epidemiological and genetic data
  ☆31Updated 4 months ago
• gmbecker / genbankr
  ☆16Updated last year
• jennahamlin / tinselR
  An Amazing Shiny App
  ☆17Updated 3 years ago
• vdblab / FLORAL
  Fit LOg-RAtio Lasso regression for compositional covariates
  ☆12Updated this week
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year
• m-jahn / fluctuator
  R package to Import and Modify SVG (XML) Graphic Files
  ☆22Updated 2 months ago
• outbreak-info / R-outbreak-info
  R package to access the genomics and epidemiology data and Research Library metadata compiled and standardized on outbreak.info.
  ☆20Updated last year
• mikemc / differential-abundance-theory
  A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.
  ☆12Updated last year
• abschneider / StrainHub
  Welcome to the StrainHub Repo - Files and Data - StrainHub Online:
  ☆16Updated 2 years ago
• arendsee / rhmmer
  Simple R utilities for working with HMMER
  ☆18Updated 3 months ago
• ngs-docs / 2023-snakemake-book-draft
  A DRAFT, early stage book on snakemake.
  ☆18Updated last year
• SchlossLab / mikropml-snakemake-workflow
  Snakemake template for building reusable and scalable machine learning pipelines with mikropml
  ☆12Updated last year
• tbradley1013 / tree-subset-shiny
  This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees
  ☆14Updated 6 years ago
• Bioconductor / Biostrings
  Efficient manipulation of biological strings
  ☆60Updated last month
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆54Updated 6 months ago
• statdivlab / tinyvamp
  ☆19Updated last year
• mikemc / metacal
  Metagenomics calibration R package
  ☆18Updated 2 years ago
• grubaughlab / DENV_pipeline
  ☆15Updated last week
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆58Updated last month
• covince / covince
  Tool for visualising viral lineages in space and time. As seen on covid19.sanger.ac.uk and covglobe.org.
  ☆10Updated 2 years ago
• danlwarren / RWTY
  R We There Yet?
  ☆30Updated 2 years ago
• ELTEbioinformatics / mulea
  mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate
  ☆27Updated last month
• sdwfrost / influenza-dynamics-practical-h5n1
  Inferring spatiotemporal dynamics of H5N1 influenza from sequence data
  ☆10Updated 11 years ago
• emvolz / treedater
  Scalable relaxed clock phylogenetic dating
  ☆24Updated 10 months ago
• heike / gglogo
  R package for creating sequence logo plots
  ☆22Updated 11 months ago