acorg / Racmacs
Racmacs R package for performing antigenic cartography
☆21Updated 10 months ago
Alternatives and similar repositories for Racmacs
Users that are interested in Racmacs are comparing it to the libraries listed below
Sorting:
- ☆19Updated last year
- R package for multiple sequence alignment☆19Updated last month
- A Toolbox for Manipulating Biological Sequences in R☆22Updated 2 years ago
- Seamless Integration of BLAST Sequence Searches in R☆31Updated last year
- An Amazing Shiny App☆17Updated 3 years ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- Metagenomics calibration R package☆20Updated 3 years ago
- R interface to 'Gos'☆39Updated 2 years ago
- An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)☆19Updated last week
- gcplyr is an R package that facilitates wrangling and analysis of microbial growth curve data☆34Updated 2 months ago
- BLAST-like algorithm for R based on the nsearch library (https://github.com/stevschmid/nsearch)☆14Updated last year
- Extended ComplexHeatmap☆11Updated 4 months ago
- An R package for displaying binary trees, aiming to represent multiple layers of information on dendrogram leaves.☆12Updated 3 years ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Updated last year
- ☆12Updated 6 months ago
- Methods used in the article "Assessment of statistical methods from single cell, bulk RNA-seq and metagenomics applied to microbiome data…☆10Updated 4 years ago
- Drawing 'dendrogram' using 'ggtree'☆13Updated last month
- Snakemake template for building reusable and scalable machine learning pipelines with mikropml☆12Updated 2 months ago
- Calculate distances between phylogenetic trees in R☆32Updated 2 weeks ago
- ☆19Updated last year
- Fit LOg-RAtio Lasso regression for compositional covariates☆13Updated 3 weeks ago
- Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whos…☆47Updated 3 years ago
- A Tidy Tool for Phylogenetic Tree Data Manipulation☆56Updated 9 months ago
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆24Updated 9 months ago
- R package to access the genomics and epidemiology data and Research Library metadata compiled and standardized on outbreak.info.☆20Updated 2 years ago
- Omics Data Analysis Tools☆11Updated 5 months ago
- ☆20Updated last month
- K-mer Counting for Biological Sequence Analysis☆27Updated 5 years ago
- Tools to make it easy to work with microtiter plate-shaped data☆23Updated 6 months ago
- phylogenetic analyses informed by deep mutational scanning data☆14Updated 11 months ago