Alternatives and similar repositories for linguaPhylo

Users that are interested in linguaPhylo are comparing it to the libraries listed below

• tgvaughan / MASTER
  A versatile simulation engine for stochastic population dynamics models.
  ☆22Updated 2 years ago
• MesserLab / SLiM-Extras
  Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself
  ☆43Updated 4 months ago
• nstenz / TICR
  ☆26Updated 4 years ago
• xavierdidelot / TransPhylo
  Reconstruction of transmission trees using genomic data
  ☆63Updated last year
• sdellicour / seraphim
  R package for studying phylogenetically-informed movements (Dellicour et al. 2016, Bioinformatics; Dellicour et al., in prep.)
  ☆34Updated last week
• bodkan / slendr
  Population genetic simulations in R 🌍
  ☆60Updated 3 weeks ago
• revbayes / revbayes
  Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
  ☆69Updated last week
• artic-network / civet
  Cluster Investigation & Virus Epidemiology Tool
  ☆50Updated 2 months ago
• FePhyFoFum / phyx
  phylogenetics tools for linux (and other mostly posix compliant) computers
  ☆121Updated 7 months ago
• emmanuelparadis / pegas
  Population and Evolutionary Genetics Analysis System
  ☆29Updated 5 months ago
• danlwarren / RWTY
  R We There Yet?
  ☆31Updated 5 months ago
• uqrmaie1 / admixtools
  ☆83Updated 2 months ago
• MesserLab / SLiM
  SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexib…
  ☆188Updated this week
• gvbarroso / iSMC
  The integrated Sequentially Markovian Coalescent
  ☆14Updated 3 months ago
• grubaughlab / DENV_pipeline
  ☆17Updated 5 months ago
• phylogeography / SpreaD3
  Spatial Phylogenetic Reconstruction of Evolutionary Dynamics 3
  ☆16Updated 2 years ago
• emvolz-phylodynamics / treestructure
  ☆18Updated last month
• noemielefrancq / Phylowave_Learning-fitness-dynamics-pathogens-in-phylogenies
  Code for the paper "Learning the fitness dynamics of pathogens from phylogenies"
  ☆21Updated 4 months ago
• revbayes / revbayes.archive
  ☆68Updated last year
• cov-lineages / pangolin-data
  Repository for storing latest model, protobuf, designation hash and alias files for pangolin assignments
  ☆31Updated 2 months ago
• tothuhien / lsd2
  A phylogeny dating method using least-squares algorithms and criteria
  ☆28Updated 10 months ago
• 4ment / phylostan
  Phylogenetic inference using Stan
  ☆23Updated 5 months ago
• dipetkov / eems
  Estimating Effective Migration Surfaces
  ☆105Updated last year
• gtonkinhill / rhierbaps
  rhierbaps: R implementation of hierBAPS
  ☆35Updated 4 years ago
• theosanderson / chronumental
  Estimating time trees from very large phylogenies
  ☆27Updated last year
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆36Updated last year
• David-Peede / BIOL1435
  Resources for Brown University's BIOL 1435 course.
  ☆19Updated last year
• jade-cheng / ohana
  mixture classification, constraint optimization, outlier detection, population structure, admixture history, and selection detection.
  ☆87Updated 4 years ago
• LarsNauheimer / HybPhaser
  Workflow to detect and phase hybrids in target capture data
  ☆20Updated 2 years ago
• andersen-lab / avian-influenza
  Consensus sequences for U.S. H5N1 clade 2.3.4.4b
  ☆36Updated last week