LinguaPhylo: A language for describing, visualising and simulating probabilistic phylogenetic models
☆20Apr 18, 2026Updated last week
Alternatives and similar repositories for linguaPhylo
Users that are interested in linguaPhylo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A versatile simulation engine for stochastic population dynamics models.☆23Nov 11, 2022Updated 3 years ago
- CellCoal: coalescent simulation of single-cell NGS genotypes☆15Feb 10, 2025Updated last year
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆44Updated this week
- Utilities and distributions for (birth-death) skyline models.☆10Aug 27, 2019Updated 6 years ago
- CellPhy: accurate and fast probabilistic inference of single-cell phylogenies☆20Jan 8, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bacterial phylogenetics in BEAST 2.☆18Mar 30, 2023Updated 3 years ago
- Faster multispecies coalescent inference using multilocus data☆15Aug 13, 2023Updated 2 years ago
- Coalescent simulation and likelihood for phylodynamic inference☆14May 15, 2025Updated 11 months ago
- R tools for posterior analyses using BEAST☆20Apr 10, 2019Updated 7 years ago
- Volumetric data sampler and streamer for training 3D deep learning models.☆15Mar 31, 2017Updated 9 years ago
- Real time and remote MCMC trace monitoring with BEASTIARY.☆21Updated this week
- Spread visualizes how viruses and other pathogens are spreading in time and space. It creates compellable shareable, interactive and time…☆20Jan 23, 2025Updated last year
- Support EMCRs to develop their computing skills☆13Apr 21, 2026Updated last week
- R We There Yet?☆32Mar 27, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Implementing semantically rich NeXML I/O in R☆15May 6, 2024Updated last year
- Bayesian Evolutionary Analysis by Sampling Trees☆273Mar 27, 2026Updated last month
- ☆13Nov 1, 2022Updated 3 years ago
- Consensus sequences for U.S. H5N1 clade 2.3.4.4b☆37Updated this week
- Lightweight header-only C++ library for loading and traversing trees☆24Mar 9, 2025Updated last year
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Dec 8, 2025Updated 4 months ago
- An R API to the Oxford COVID-19 Database☆12May 7, 2021Updated 4 years ago
- Public data from the Glazy database☆13Feb 27, 2026Updated 2 months ago
- Tutorial on Bayesian phylogenetic analysis☆52Sep 21, 2017Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Scalable relaxed clock phylogenetic dating☆28Sep 3, 2025Updated 7 months ago
- BOSTIn is a new, user-friendly phylogenetic artifact identification package.☆11Mar 28, 2026Updated last month
- Bayesian Evolutionary Analysis Sampling Trees☆241Apr 20, 2026Updated last week
- Minimal Supplying Community Search with constraint-based optimization methods.☆16Updated this week
- Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States☆27Aug 14, 2025Updated 8 months ago
- Higher-Order Co-occurrence☆12Nov 9, 2021Updated 4 years ago
- A forward-time simulator for gene sequences modeling a variety of mutation and selection processes.☆20Aug 23, 2023Updated 2 years ago
- Port of Python's pdfminer to Lisp☆15Jan 30, 2016Updated 10 years ago
- ☆25Jun 25, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- rapid phylogenomic tree calculator - A highly customizable framework for reproducible phylogenomic inference☆28Apr 17, 2026Updated last week
- Quartet-based species tree and tree of blob estimation☆16Feb 10, 2026Updated 2 months ago
- Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata☆12Feb 27, 2026Updated 2 months ago
- Bayesian co-estimation of phylogenies and multiple alignments via MCMC☆50Updated this week
- Community detection method for multidimensional networks☆11Mar 3, 2025Updated last year
- Website to help you speak more concisely.☆10Dec 27, 2022Updated 3 years ago
- ☆21Dec 30, 2025Updated 4 months ago