Alternatives and similar repositories for Bioinfor_researchers_atlas

Users that are interested in Bioinfor_researchers_atlas are comparing it to the libraries listed below

• sajuukLyu / Protocols-4pub
  Multi-omics analysis protocols by Lyu.
  ☆52Updated 2 years ago
• OpenGene / scrnapip
  A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis
  ☆112Updated 2 years ago
• NBISweden / single-cell_sib_scilifelab_2021
  SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/
  ☆23Updated 4 years ago
• cailab-tamu / scTenifoldKnk
  R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.
  ☆81Updated last month
• jasonHKU0907 / proteome-phenome-atlas
  ☆68Updated 8 months ago
• mdozmorov / Immuno_notes
  Immunology-related bioinformatics data and tools
  ☆75Updated last year
• Durenlab / LINGER
  ☆117Updated 5 months ago
• angelettilab / scMouseBcellFlu
  ☆18Updated 3 years ago
• crazyhottommy / papers_with_data_to_mine
  published papers with a lot of data
  ☆74Updated 6 months ago
• alexyermanos / Platypus
  R package for the analysis of single-cell immune repertoires
  ☆43Updated 8 months ago
• mdozmorov / scATAC-seq_notes
  scATAC-seq data analysis tools and papers
  ☆125Updated 4 months ago
• saezlab / dorothea
  R package to access DoRothEA's regulons
  ☆152Updated last year
• zktuong / dandelion
  dandelion - A single cell BCR/TCR V(D)J-seq analysis package for 10X Chromium 5' data
  ☆121Updated last week
• rnakato / ShortCake
  A docker image for single-cell analysis
  ☆94Updated last week
• liulab-dfci / RIMA_pipeline
  ☆87Updated 2 months ago
• lanagarmire / Asgard
  ☆44Updated last year
• TheHumphreysLab / plot1cell
  ☆115Updated last month
• singleron-RD / CeleScope
  Single Cell Analysis Pipelines
  ☆108Updated 3 weeks ago
• s175573 / GIANA
  Ultrafast TCR clustering algorithm based on geometric isometry
  ☆69Updated last year
• liulab-dfci / MAGeCK
  Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…
  ☆31Updated 4 years ago
• LocasaleLab / Single-Cell-Metabolic-Landscape
  Pipeline for exploring metebolic heterogeneity at single-cell resolution
  ☆74Updated 5 years ago
• MGI-tech-bioinformatics / DNBelab_C_Series_HT_scRNA-analysis-software
  An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets
  ☆117Updated last week
• PierreBSC / Viral-Track
  ☆62Updated 5 years ago
• SONGDONGYUAN1994 / scDesign3
  scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics
  ☆107Updated last month
• quadbio / scMultiome_analysis_vignette
  Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis
  ☆68Updated last year
• ajwilk / 2020_Wilk_COVID
  Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…
  ☆49Updated 4 years ago
• bioinfo-ibms-pumc / SCSA
  SCSA: cell type annotation for single-cell RNA-seq data
  ☆92Updated 2 years ago
• mhorlbeck / ScreenProcessing
  ☆67Updated 2 years ago
• gao-lab / Cell_BLAST
  A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.
  ☆93Updated last year
• broadinstitute / Celligner_ms
  Code related to the Celligner manuscript
  ☆46Updated 5 years ago