asntech / intervene-shiny
An interactive Shiny App for UpSet plots, Venn diagrams and Pairwise heatmaps
☆21Updated 6 years ago
Alternatives and similar repositories for intervene-shiny:
Users that are interested in intervene-shiny are comparing it to the libraries listed below
- R package wrapping bedtools☆38Updated this week
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- Summer school course materials collection☆25Updated 6 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆36Updated last month
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆28Updated last month
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆16Updated 7 years ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆28Updated 9 years ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆14Updated 4 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆18Updated 5 years ago
- Representation and manipulation of genomic intervals☆44Updated 3 months ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- ☆32Updated last year
- Tutorial to reproduce the analysis of Peixoto et al. (2015)☆9Updated 9 years ago
- A tidy interface for coverage analysis☆24Updated 5 years ago
- Visualise correlation results and test significancies of these☆21Updated 5 years ago
- VennDetail: a bioconductor package for VennDiagram visualization and details extraction☆29Updated 3 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 5 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆32Updated 2 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆25Updated 2 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- ☆28Updated 7 months ago
- Motif manipulation functions for R.☆28Updated 3 months ago
- An R package to interpret biological trends from DNA methylation data☆16Updated 2 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆43Updated 3 months ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- ATAC_seq Workshop☆14Updated 7 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- Molecular Signatures Database (MSigDB) in a data frame☆25Updated 4 months ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆19Updated last year