An interactive Shiny App for UpSet plots, Venn diagrams and Pairwise heatmaps
☆21Apr 3, 2018Updated 7 years ago
Alternatives and similar repositories for intervene-shiny
Users that are interested in intervene-shiny are comparing it to the libraries listed below
Sorting:
- Data visualization with R☆12Dec 12, 2020Updated 5 years ago
- R htmlwidget package for ideogram.js☆15Oct 26, 2022Updated 3 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Oct 7, 2019Updated 6 years ago
- GEMINI: A variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens☆16Nov 29, 2022Updated 3 years ago
- ☆12Jul 30, 2018Updated 7 years ago
- a web-based R shiny application that wraps DESeq2 R package☆13Apr 19, 2020Updated 5 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Dec 3, 2018Updated 7 years ago
- Analysing Capture Seq Count Data☆13Jun 11, 2018Updated 7 years ago
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 5 years ago
- An Interactive Consensus Clustering framework for Cross-platform data analysis☆14Jan 28, 2022Updated 4 years ago
- Pipelines for NGS data preprocessing by the Bock lab and friends☆22Aug 29, 2022Updated 3 years ago
- Gene Set Enrichment Analysis and Over Representation Analysis analysis using R☆21Jun 20, 2019Updated 6 years ago
- The source code of web server TIP, including example data.☆21Mar 28, 2019Updated 6 years ago
- Curated list of TCGA resources☆59Nov 10, 2017Updated 8 years ago
- analysis of single cell RNA sequencing data and cell type annotation☆19Jan 2, 2020Updated 6 years ago
- GSCALite: Gene set for cancer analysis☆23May 25, 2022Updated 3 years ago
- Code to reproduce TNBC analysis and figures☆24Jun 13, 2022Updated 3 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Mar 29, 2019Updated 6 years ago
- DIABLO - an integrative multi-group, multi-dataset classification method☆27Feb 26, 2019Updated 7 years ago
- An assistive shiny application toolkit built for scaling and standardizing application development☆24Nov 7, 2023Updated 2 years ago
- DRUGZ software☆24Aug 9, 2021Updated 4 years ago
- Calculating Tumor microenvironment score☆29Jan 20, 2023Updated 3 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Jul 10, 2023Updated 2 years ago
- Howto and implementation documentation☆22Feb 24, 2026Updated last week
- scITDG is a tool for identifying time-dependent genes in single-cell sequencing data☆13Nov 24, 2025Updated 3 months ago
- ☆12Oct 29, 2025Updated 4 months ago
- Easy to define segments in y-axis for 'ggplot2'.☆27Oct 6, 2019Updated 6 years ago
- DISCOVER co-occurrence and mutual exclusivity analysis for cancer genomics data☆32May 1, 2025Updated 10 months ago
- Cancer Dependency Map package☆33Aug 16, 2024Updated last year
- 'grid' Pattern Grobs☆32May 25, 2025Updated 9 months ago
- A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v…☆32Sep 14, 2020Updated 5 years ago
- Redraw base graphics as grid graphics☆35Feb 26, 2026Updated last week
- A Shiny framework for workflow management and data visualization☆34May 20, 2025Updated 9 months ago
- ggcor备用源,版权归houyunhuang所有,本源仅供应急使用☆35Sep 7, 2020Updated 5 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆34Dec 29, 2020Updated 5 years ago
- ☆18Jul 15, 2025Updated 7 months ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆32Mar 21, 2019Updated 6 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.☆31Nov 27, 2017Updated 8 years ago