asntech / intervene-shiny
An interactive Shiny App for UpSet plots, Venn diagrams and Pairwise heatmaps
☆21Updated 6 years ago
Alternatives and similar repositories for intervene-shiny:
Users that are interested in intervene-shiny are comparing it to the libraries listed below
- Interactive R package to quantify, analyse and visualise alternative splicing☆36Updated this week
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆28Updated 9 years ago
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆16Updated 7 years ago
- R package wrapping bedtools☆38Updated 3 weeks ago
- Motif manipulation functions for R.☆28Updated 4 months ago
- Tutorial to reproduce the analysis of Peixoto et al. (2015)☆9Updated 9 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- A tidy interface for coverage analysis☆24Updated 5 years ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆21Updated 2 months ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆14Updated 4 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆28Updated 2 months ago
- ATAC_seq Workshop☆14Updated 7 years ago
- Summer school course materials collection☆25Updated 6 years ago
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆22Updated last year
- VennDetail: a bioconductor package for VennDiagram visualization and details extraction☆29Updated 3 years ago
- Visualise correlation results and test significancies of these☆22Updated 5 years ago
- Identify and correct invalid gene symbols☆59Updated 3 months ago
- An htmlwidget version of igv, for RStudio and Shiny apps☆37Updated 3 months ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis☆16Updated 4 years ago
- ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnr…☆15Updated 3 years ago
- Representation and manipulation of genomic intervals☆44Updated 3 months ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆44Updated 3 months ago
- Make rapid visualizations of RNA-seq data in R☆19Updated 5 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆21Updated 2 years ago
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆31Updated 3 years ago
- Genomic plot in trellis layout☆39Updated last year
- An R interface to the MEME Suite☆49Updated 5 months ago
- ☆32Updated last year
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago