The ChIP-Seq peak calling algorithm using convolution neural networks
☆15Jan 18, 2021Updated 5 years ago
Alternatives and similar repositories for CNNPeaks
Users that are interested in CNNPeaks are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- One-class classifiers for anomaly detection (outlier detection)☆16Sep 2, 2020Updated 6 years ago
- R/Shiny package for network-integrated pathway enrichment analysis☆14Dec 2, 2020Updated 5 years ago
- BPNet manuscript code.☆12Dec 1, 2020Updated 5 years ago
- ☆16Jun 3, 2025Updated last year
- A hierarchical deep learning framework for ncRNA-protein interaction prediction.☆14Nov 25, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- detection of duplications and deletions using Python based machine learning techniques☆28Jul 22, 2019Updated 7 years ago
- Machine Learning Specialization by Andrew Ng in collaboration between DeepLearning.AI and Stanford Online in Coursera.☆12Jan 14, 2023Updated 3 years ago
- Fast python code to merge paired-end reads☆13Oct 29, 2021Updated 4 years ago
- Drug Response Estimation from single-cell Expression Profiles☆13Jan 5, 2024Updated 2 years ago
- Python script to produce publication-ready nuclear chart plots☆14Oct 3, 2024Updated last year
- ☆21Jun 29, 2021Updated 5 years ago
- List of notes, codes and everything necessary to my course on theoretical nuclear physics☆20Mar 13, 2021Updated 5 years ago
- An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms☆19Mar 23, 2020Updated 6 years ago
- Differential ATAC-seq toolkit☆29Dec 21, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆21Aug 11, 2021Updated 5 years ago
- ☆19Aug 29, 2025Updated last year
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆185Mar 19, 2026Updated 5 months ago
- Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance☆10Jan 21, 2025Updated last year
- ☆32Jun 23, 2026Updated 2 months ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Jul 7, 2017Updated 9 years ago
- Modelling RBP binding preferences to predict RPB binding sites☆11Mar 4, 2021Updated 5 years ago
- Convert DeepBind models to Keras☆12Jul 15, 2018Updated 8 years ago
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆11Oct 7, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- de Bruijn graph cOrrectiOn from graph aLignment☆11Jul 20, 2020Updated 6 years ago
- Open-source laser beam profiling application using low-cost Arducam monochromatic camera and python on Windows☆20Nov 29, 2025Updated 9 months ago
- A toolset to analyze genomic footprinting data☆21Jul 28, 2026Updated last month
- Mutational Signature Comprehensive Analysis Toolkit☆16Apr 11, 2026Updated 4 months ago
- Automated & Koreanized of "HCI Memtest" (RAM Stress Tool)☆14Mar 11, 2023Updated 3 years ago
- Nucleic acids Structure Prediction☆10May 21, 2020Updated 6 years ago
- A collection of scripts used to recreate files and graphs used in the MMRF CoMMpass analysis.☆25Nov 23, 2025Updated 9 months ago
- Breast tumor malignancy classification using machine learning☆14Feb 24, 2018Updated 8 years ago
- An R package for annotation of circular RNAs☆11Mar 30, 2020Updated 6 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Multi-scale Detection of Chromatin Loops from Hi-C and Micro-C Maps using Scale-Space Representation☆84Jan 24, 2025Updated last year
- Python API to access and manipulate ELOG.☆26Sep 15, 2025Updated 11 months ago
- Collection of R functions used in the Hochwagen Lab☆12Aug 4, 2025Updated last year
- Official Pytorch implementation of PLUS (Protein sequence representations Learned Using Structural information), IEEE Access 2021☆42Sep 5, 2023Updated 2 years ago
- A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences☆15Updated this week
- Nextflow implementation of the smoove workflow and other tools for SV calling and QC☆12Nov 12, 2020Updated 5 years ago
- Visualisation application for Klebsiella genotypes generated by Kleborate.☆10Mar 10, 2026Updated 5 months ago