Base for the Viral Genomics and Bioinformatics Repository
☆17Jul 5, 2024Updated last year
Alternatives and similar repositories for ViralBioinfAsia2022
Users that are interested in ViralBioinfAsia2022 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool for analysing viral diversity from High Throughput Sequencing☆12Nov 20, 2025Updated 6 months ago
- Phylotype your strains using Clermont's 2013 method: ezclermont.org☆15May 5, 2026Updated last month
- Bio::Phylo - Phyloinformatic analysis using Perl☆17Dec 11, 2025Updated 6 months ago
- ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichmen…☆21Nov 15, 2022Updated 3 years ago
- Nextflow workflow template repository☆20Mar 12, 2026Updated 3 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Predict prokaryotic hosts for phage (meta) genomic sequences☆11Apr 4, 2022Updated 4 years ago
- VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies☆152Jun 9, 2026Updated last week
- ☆12Feb 15, 2023Updated 3 years ago
- Five pillars of computational reproducibility☆11Feb 6, 2024Updated 2 years ago
- Ultrafast sequence typing and gene detection from NGS raw reads☆20Apr 15, 2021Updated 5 years ago
- Prophage Activity Estimator☆33May 30, 2024Updated 2 years ago
- Assign genotypes to Salmonella Typhi genomes based on VCF files (mapped to Typhi CT18 reference genome)☆30Jul 18, 2025Updated 10 months ago
- A simple nextflow pipeline for running kraken2 and bracken in a docker container☆21Oct 8, 2025Updated 8 months ago
- In silico taxonomic classification of Bacillus cereus group genomes using whole-genome sequencing data☆24May 8, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- An extensible Ruby on Rails web-service application and database for visualising HTGS data☆18Mar 7, 2014Updated 12 years ago
- AncestralClust☆13Jul 9, 2025Updated 11 months ago
- TaxTriage is a Nextflow workflow designed to agnostically identify and classify microbial organisms within short- or long-read metagenomi…☆75Updated this week
- Program for estimating dN/dS in overlapping genes (OLGs)☆14Dec 2, 2022Updated 3 years ago
- Searching large collections of sequencing data with genome-scale queries☆18Jun 8, 2026Updated last week
- A taxonomic classifier of plasmids☆28Jul 7, 2021Updated 4 years ago
- Set of tools for viral metagenomics.☆17Jun 1, 2026Updated 2 weeks ago
- MOVIS: A Multi-Omics Software Solution for Multi-modal Time-Series Clustering, Embedding, and Visualizing Tasks, by Aleksandar Anžel, Dom…☆10May 17, 2022Updated 4 years ago
- This is a repository of the scLinaX R package developed in the Tomofuji et al (Quantification of escape from X chromosome inactivation wi…☆11Sep 12, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PANgenome with Annotations, COre identification, Tree and corresponding Alignments☆80Sep 20, 2023Updated 2 years ago
- Easy-to-use web application for visualization and comparison of genomes in Genbank file☆22May 27, 2022Updated 4 years ago
- FHIR resources Release R5☆11Jul 3, 2023Updated 2 years ago
- ☆11Jan 12, 2024Updated 2 years ago
- Intra-species bacterial contamination detection☆25Apr 13, 2026Updated 2 months ago
- ☆12Dec 22, 2025Updated 5 months ago
- ☆14Sep 18, 2018Updated 7 years ago
- Genome-informed, trait-based dynamic energy budget modeling of microbes with ML analysis of emergent strategies☆19Feb 18, 2026Updated 3 months ago
- VirBot: a protein-based RNA virus detector for metagenomic data☆34Jul 29, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ☆11Sep 19, 2017Updated 8 years ago
- Methods to determine sequence element (unitig) presence/absence☆25Mar 6, 2026Updated 3 months ago
- A collection examples on Aidbox☆17Jun 5, 2026Updated last week
- Small utility script to submit genomes to PHASTER for phage detection☆26Oct 21, 2021Updated 4 years ago
- ☆15Dec 8, 2022Updated 3 years ago
- BRIG is a cross-platform (Windows/Mac/Linux) application that displays circular comparison images of multiple genomes using BLAST.☆50Jun 2, 2026Updated 2 weeks ago
- Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.☆11Aug 25, 2024Updated last year