Deprecated : Use https://github.com/drpowell/degust
☆44Apr 25, 2017Updated 9 years ago
Alternatives and similar repositories for degust
Users that are interested in degust are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An interactive web-tool for RNA-seq analysis☆73May 21, 2026Updated 5 months ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11May 21, 2026Updated 5 months ago
- TGAC's Genome Browser☆11Oct 22, 2025Updated last year
- A utility for splitting mixed origin NGS reads☆10Jun 1, 2021Updated 5 years ago
- DEPRECATED Lightweight bioinformatics pipeline tools using iPython☆14Dec 11, 2015Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆26Oct 5, 2015Updated 11 years ago
- The original version of MGA has been archived - please see https://github.com/crukci-bioinformatics/mga2 instead.☆24Apr 15, 2021Updated 5 years ago
- What's The Function of these genes?☆22Mar 17, 2017Updated 9 years ago
- perform genotype-phenotype-association tests on a VCF with logistic regression.☆20Dec 15, 2015Updated 10 years ago
- Interactive Visual Analysis of differential gene expression test results☆22Jan 9, 2017Updated 9 years ago
- Creates a rarefaction curve to measure complexity in RNA Seq data using start position☆13Apr 2, 2017Updated 9 years ago
- A R/shiny web application to browse and compare public RNA-seq / ChIP-seq / CAGE datasets☆18Jul 10, 2020Updated 6 years ago
- ☆22Jan 13, 2017Updated 9 years ago
- Homebrew repository for CloudBioLinux: incubator for formulas to end up in homebrew-science☆19Oct 17, 2016Updated 10 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Infrastructure code to support DNA pipeline☆38May 5, 2015Updated 11 years ago
- ☆17Sep 24, 2013Updated 13 years ago
- example of shiny plots which react to clicking on points☆11Jun 18, 2015Updated 11 years ago
- TOP results by CONfident efFECT Sizes.☆15Dec 9, 2024Updated last year
- Simple interval class for fast fasta access☆10Jun 18, 2012Updated 14 years ago
- Glimma R package☆50Sep 2, 2024Updated 2 years ago
- ☆18Jan 17, 2019Updated 7 years ago
- Dynamic Venn diagrams for differential gene expression☆29Jul 4, 2023Updated 3 years ago
- Interface between matplotlib and plotly☆13Jun 26, 2014Updated 12 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A small library for ranges/intervals, for use with genomic data.☆17Nov 27, 2012Updated 13 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Jun 4, 2024Updated 2 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Jul 7, 2017Updated 9 years ago
- Scallop is a reference-based transcriptome assembler for RNA-seq☆95Apr 30, 2021Updated 5 years ago
- STORMSeq: Scalable Tools for Open-source Read Mapping☆19May 19, 2014Updated 12 years ago
- A collection of well-known bioinformatics programs.☆25Apr 24, 2015Updated 11 years ago
- Compare assembly graph file formats☆16Jul 23, 2015Updated 11 years ago
- ☆43Apr 20, 2016Updated 10 years ago
- vcf file manipulation☆22Jul 9, 2015Updated 11 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Standalone C library for assembling Illumina short reads in small regions☆72Dec 15, 2022Updated 3 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- A package for simulating RNA-seq library preparation with parameter estimation☆23Mar 3, 2014Updated 12 years ago
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆106Jan 12, 2026Updated 9 months ago
- An integrated high performance bioinformatics toolkit☆23Apr 24, 2019Updated 7 years ago
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆15May 21, 2014Updated 12 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Oct 31, 2019Updated 7 years ago