Alternatives and similar repositories for tidygenomics

Users that are interested in tidygenomics are comparing it to the libraries listed below

• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆73Updated last year
• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆112Updated last year
• tidyomics / plyranges
  A grammar of genomic data transformation
  ☆145Updated last month
• Shians / Glimma
  Glimma R package
  ☆50Updated 8 months ago
• gladkia / igvShiny
  An htmlwidget version of igv, for RStudio and Shiny apps
  ☆38Updated 6 months ago
• joey711 / shiny-phyloseq
  An interactive web application for demonstrating and using phyloseq.
  ☆60Updated 5 years ago
• rnabioco / valr
  Genome Interval Arithmetic in R
  ☆91Updated 2 weeks ago
• tpq / propr
  [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
  ☆71Updated this week
• lvulliard / BioCircos.R
  Htmlwidgets binding R commands to the BioCircos.js library
  ☆38Updated 6 years ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated 2 weeks ago
• pinin4fjords / shinyngs
  Shiny apps for NGS etc based on reusable components created using Shiny modules
  ☆85Updated 2 weeks ago
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated last month
• hansenlab / minfi
  Devel repository for minfi
  ☆61Updated last year
• jminnier / STARTapp
  The START App: R Shiny Transcriptome Analysis Resource Tool
  ☆90Updated 4 years ago
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆72Updated last week
• js229 / Vennerable
  Vennerable provides Venn diagrams in R. It displays Venn and Euler diagrams for up to 9 different sets and using a variety of geometries.…
  ☆91Updated 4 years ago
• Gregor-Mendel-Institute / mlmm
  An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations
  ☆16Updated 7 years ago
• gladkia / igvR
  An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser
  ☆45Updated 6 months ago
• cooplab / Popgen_EVE102_2012
  Pdfs of slides from 2018 popgen course
  ☆36Updated 6 years ago
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆46Updated last month
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆53Updated last month
• SISBID / Supervised-Learning
  ☆49Updated 8 months ago
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆92Updated 3 weeks ago
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆75Updated last week
• variani / lme4qtl
  Mixed models @lme4 + custom covariances + parameter constraints
  ☆53Updated 4 years ago
• jokergoo / gtrellis
  Genomic plot in trellis layout
  ☆39Updated last year
• seandavi / wdlRunR
  Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
  ☆34Updated 3 years ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆149Updated last year
• StoreyLab / biobroom
  Tidy up computational biology objects
  ☆49Updated 6 years ago