SuperBianC / scMulan
Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.
☆57Updated 9 months ago
Alternatives and similar repositories for scMulan:
Users that are interested in scMulan are comparing it to the libraries listed below
- single cell foundation model for Gene network inference and more☆56Updated this week
- Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.☆64Updated 2 months ago
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆83Updated 2 months ago
- ☆42Updated 2 weeks ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆52Updated 8 months ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆37Updated 3 months ago
- GeneCompass☆71Updated 8 months ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆61Updated 9 months ago
- Transformer for One-Stop Interpretable Cell-type Annotation☆138Updated last year
- A modular framework for multimodal cross-cell-type transcriptional regulation models☆64Updated 2 weeks ago
- Code for evaluating single cell foundation models scBERT and scGPT☆40Updated 6 months ago
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆114Updated 3 weeks ago
- Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".☆53Updated 2 months ago
- ☆55Updated last year
- ☆57Updated 6 months ago
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆78Updated 11 months ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆40Updated last year
- ☆57Updated 6 months ago
- ☆51Updated last month
- Predict RNA velocity through deep learning☆66Updated last year
- A model developed for the generation of scRNA-seq data☆52Updated 3 weeks ago
- ☆30Updated 2 years ago
- Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space☆76Updated 3 months ago
- End-to-end analysis of spatial multi-omics data☆41Updated last month
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆90Updated 2 weeks ago
- ☆55Updated 7 months ago
- ☆17Updated 2 years ago
- ☆50Updated 3 months ago
- ☆9Updated last year