bei-lab / scRNA-AHCA
Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs
☆39Updated last year
Alternatives and similar repositories for scRNA-AHCA:
Users that are interested in scRNA-AHCA are comparing it to the libraries listed below
- ☆30Updated 3 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆26Updated 2 years ago
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆44Updated 3 months ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆34Updated 4 years ago
- scWGCNA☆58Updated 2 years ago
- ☆60Updated 4 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- Code repository for single cell RNA-seq☆34Updated 4 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆63Updated 5 months ago
- Code used in article: Tracing cell-type evolution by cross-species comparison of cell atlases☆18Updated 4 years ago
- Accurate and fast cell marker gene identification with COSG☆43Updated last week
- ☆59Updated 5 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆28Updated 2 months ago
- Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…☆28Updated 5 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆44Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆27Updated 3 months ago
- R-code used for single-cell RNA-Seq analysis of kidney data.☆18Updated 5 years ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆39Updated 3 years ago
- Integration of gut cell atlases☆23Updated last month
- Functions for single cell data analysis☆31Updated 3 years ago
- ☆32Updated 3 years ago
- Tools used in Human Cell Landscape(HCL)☆54Updated 4 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated 9 months ago
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Updated 2 years ago
- ☆15Updated 2 years ago
- Identifying tumor cells at the single-cell level using machine learning☆47Updated 4 months ago
- ☆61Updated 9 months ago
- scGSVA: Perform GSVA for single cell RNA seq☆55Updated 4 months ago